Gene Tpen_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0125 
Symbol 
ID4602187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp99047 
End bp99655 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content58% 
IMG OID639772879 
Producthypothetical protein 
Protein accessionYP_919538 
Protein GI119719043 
COG category[S] Function unknown 
COG ID[COG1590] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.866911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCC ACGCGCGTAG CTCGGCGGGC GGCGACCCGT GGGAGTATCT GCGCAGAAAG 
GCGTTGGAGC AGTTCGAAAG GCACCTTGAA GAGGGGCGTG TAGACGAAGA CATAGTCGAC 
TTGCTAAGGC TTGTGAACAA CACCAAGAAC TGTTACACGA CGTCTAGTTG TAGCGGGCGT 
ATACAGGTAT CTTGCGGCGA GCACCCGGGC GCTAAGGGAA GGCTCGTCGT CGTGGCAAAG 
TGGCACAGGA CAGTATCCCT GCAGGAACTG GTAAGCGTTC TCGACTCGCT GCAAGAAGAA 
TCCGTTTGGC TGTCCGTACA CCCGCCCATA TTCCACGTCG TCGCGAGGGA TCTTTCGGTT 
GCTAGGAAGC TCCTCGCGGG GGCCAGGAAC TCTGGCTTCA AGCATTCGGG GATTCAGGGG 
CTAGGCAGGA GGGTGGTGGT CGAGATAATG TCCATGGAGC GTCTGGAGGT CCCGATACGC 
GTCCAGGGGG TAGAGGTCGT GAGGCGGGAA AGCCTACCCA TACTCCTTGA AACAGCTAAC 
GAGTTCCTCT TGAGGGGAAA AAGCAGGCTG GGAGTCCTGA GGAAGGTGTT CACTGAAGCC 
TGTGACTAG
 
Protein sequence
MSFHARSSAG GDPWEYLRRK ALEQFERHLE EGRVDEDIVD LLRLVNNTKN CYTTSSCSGR 
IQVSCGEHPG AKGRLVVVAK WHRTVSLQEL VSVLDSLQEE SVWLSVHPPI FHVVARDLSV 
ARKLLAGARN SGFKHSGIQG LGRRVVVEIM SMERLEVPIR VQGVEVVRRE SLPILLETAN 
EFLLRGKSRL GVLRKVFTEA CD