| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0120 |
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| Symbol | |
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| ID | 4601199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 94898 |
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| End bp | 95812 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639772874 |
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| Product | spermidine synthase |
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| Protein accession | YP_919533 |
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| Protein GI | 119719038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.14036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGG AACAAGGCTT CGGTGTGCTC TGGTATACCG AGTGGCTTAG TTCGCTGGAG
GCTCATGTTC ACGGGATAAA GAGGATAATA TACGACGGAA GGACGAAGTA CCAAAGAGTA
ACGCTCGCGG AGACAGGGTC CTTCGGGCTC ACATTATTCC TCGACGGTTA CGCGCAGAGC
TCGGAGTACG ACGAGTTCGT CTACCACGAA TCCCTCGTGC ACCCGGCTAT GCTGACGCAT
CCCCACCCGG AGAAAGTCCT AGTAATAGGT GGAGGGGAAG GGGCTACCCT CAGGGAGGTT
CTCAAGCACC CGTCGGTTAA GAGGGCCGTA ATGGTGGACA TCGACGAAGA GCTAGTCGAG
ATCGTTAAGA GGTATATGTG GAAGTGGCAC CGGTCCAGCT TCGATGACCC GAGGGTTGAG
TTACTATTCA TGGACGGCAA GAAGTTTGTG GAAGAAACGA GCGAGCGGTT CGACGTTATA
ATACTGGATC TTACAGACCC TGTTAGCGGC ACTCCCGGGG TGCACCTCTA CACGAAGGAG
TTCTACGAAA CGATATACGA TAAGCTTACG CCTCAGGGCG TCATGGTTAC ACAGGCCACC
TCGACGAGGT ACAACGTTAA AGCTTTCTCC GTTATCAATA ACACGGTTGC TAGCGTTTTT
CCGGTCGCTA GGCCGTACAA GGTCTTCGTC GCAACGTTTT ACAGCGAGTG GGGCTTTGCG
CTCGGCTCCA AGGGTAGAGA CCCCTTGAAG ATCGACAAGG AGGAGATAAG CAGGAGGCTT
CAAAGCTTAG ACCTCAGGTA CCTCGACCTG GAGACCTTCT ACTACCTCTT CCACATACCC
AAGTACATAA GGGAGGAGAT GCAGAAGTAC ACGCAGATCT CCACGAGGGA TAACCCCCTC
CAAATAGAGA TCTAG
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| Protein sequence | MAEEQGFGVL WYTEWLSSLE AHVHGIKRII YDGRTKYQRV TLAETGSFGL TLFLDGYAQS
SEYDEFVYHE SLVHPAMLTH PHPEKVLVIG GGEGATLREV LKHPSVKRAV MVDIDEELVE
IVKRYMWKWH RSSFDDPRVE LLFMDGKKFV EETSERFDVI ILDLTDPVSG TPGVHLYTKE
FYETIYDKLT PQGVMVTQAT STRYNVKAFS VINNTVASVF PVARPYKVFV ATFYSEWGFA
LGSKGRDPLK IDKEEISRRL QSLDLRYLDL ETFYYLFHIP KYIREEMQKY TQISTRDNPL
QIEI
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