| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0118 |
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| Symbol | |
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| ID | 4601607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 92553 |
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| End bp | 93383 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639772872 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_919531 |
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| Protein GI | 119719036 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.373882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGACG CCCACTGTCA CCTCACGTAT CCAGGCCTGA AAGAAAGAGT TGAAAACGTG
CTGGCAGAGG CGAGGAGAGC ATTGAAGGCT GTCGTGACTT CGGGTCTTCC ATACGACGCC
GAAAAGAGCC CCGGCTTCCC AGGAGCCAAG GAGGCTCTAG CGCTTTCGGA GAGGTATAGG
GGCTTCGTAT TCGTTACTCT AGGGCTCCAC CCCACGCAGG TGCCCGAGAT GAGCGATGAA
GAGGTAGCCG AGTACATTAA CTTCATCGAG GAAAACAGAG ACAGAATAGT GGGGATAGGC
GAGATCGGCT TGGACAAGTA CTGGTTGTCG AGCGAGGATG ACCTGAAGAG GGCGAGGGAA
GTCTTCTTGT CCTTGCTTGA AGTAGCGGAG AAACTCGGAA AGCCCGTTGT TATTCACAGC
AGGAAAGCCG AGGAGGAGGC CGTGGAGATT CTCAGTAGCT ACAGCTTGGA CGGCAGGGTG
CTCCTACACT CTTTCACCGG GAACATGACT ACGGCGAAAA AGGCGCTGGA CATGGGCTAC
TTCTTCTCCA TAAACTACAA GGTTACGAAT ACGAAGAGCA TGCGTAAAAT AGCCAAGACG
TTCCCCCTCG AAAGCATACT CACGGAGACG GATTCGCCCT TCCTTTCGCA CGAAGCAGGC
GTGAACACGC CCCTGCAGGT ACGGCTAATA CTGGAGGAGA TTTCTAGGCT CAGAGGGCTG
GGCTTTGAGG AGGTAGACGC AATTACGACA AGAAACGCAG TTTCTTTTTT CGGTTTAGAG
AAGCAAACCT CAGAGAGAAC CTCCGATAAA AGCTTACCGC GCGACACCTA G
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| Protein sequence | MIDAHCHLTY PGLKERVENV LAEARRALKA VVTSGLPYDA EKSPGFPGAK EALALSERYR
GFVFVTLGLH PTQVPEMSDE EVAEYINFIE ENRDRIVGIG EIGLDKYWLS SEDDLKRARE
VFLSLLEVAE KLGKPVVIHS RKAEEEAVEI LSSYSLDGRV LLHSFTGNMT TAKKALDMGY
FFSINYKVTN TKSMRKIAKT FPLESILTET DSPFLSHEAG VNTPLQVRLI LEEISRLRGL
GFEEVDAITT RNAVSFFGLE KQTSERTSDK SLPRDT
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