Gene Tpen_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0107 
Symbol 
ID4601010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp82818 
End bp83285 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID639772861 
Producthypothetical protein 
Protein accessionYP_919520 
Protein GI119719025 
COG category[S] Function unknown 
COG ID[COG1259] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.787303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGAGG AGGAAGTAAA GTACTACAAG GCCGACATAG CGGGCCTCTA CCCTATCAAG 
GTTCCCCAGC CTGAGGGCGA GCAAACAGCA TACCTGTTGC TCTTGGAGAC GGCTGAGTGG
AAGGATAAGG CTTTACCTAT AATCATAGGG GAAAACGAGG GGCTCGCGAT TCAAAGCGCT
CTCATGGGGG TAAAGTACGA GAGACCTATG ACTCACGACC TCATAGTGTC TATTCTCGAC
GCTCTCGGGG TAGAGGTCGA GAAAGTCTCG ATAGACGCCC TTCTAAACAA CAGCGTCTAC
ACGGCCACCA TTTACCTTAA AAGAACGGTG AACGGGAAGG TGGAAGAGAT AAACGTGGAT
TCCCGTCCGA GCGACGGGAT AGCGATAGCC GTGAGGACAG GCTCGCCGAT CTACGTCGCA
GCCCACCTGG AGAAGCACGC TAGAAGGCTA GAGGAGCTAG GAATATAG
 
Protein sequence
MSEEEVKYYK ADIAGLYPIK VPQPEGEQTA YLLLLETAEW KDKALPIIIG ENEGLAIQSA 
LMGVKYERPM THDLIVSILD ALGVEVEKVS IDALLNNSVY TATIYLKRTV NGKVEEINVD
SRPSDGIAIA VRTGSPIYVA AHLEKHARRL EELGI