| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0087 |
|---|
| Symbol | |
|---|
| ID | 4601398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 68664 |
|---|
| End bp | 69788 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639772841 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_919500 |
|---|
| Protein GI | 119719005 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCT CGGAGAGGGC TCGAGTAAGT GTAATAGTGA CGGTCTACCG TCACGCGAGG
CGCCTGCGGA GTCTCCTCGA AGCGCTGTGC AACCAGGAAA CCTCTTTCCC CGTGGAAGTG
ATTGTAGTCG CGGATGAGCC GGACGAGGAA GTCTTAGGCA TCCTGAGGGA AAAGGCTTGC
GTTAAGAGCT TGGTCTCCGA GAATAGGAGG GGGAAGGTTA GGGCTCTTAA CGAGGCGATC
TCGCTGAGCC AGGGCGACGT CCTGATTTTT CTCGACAACG ACGTGACCGT ACAGGACAGG
AAGTTCGTTG AGAAGATCTA CAAGTGGCTA CAGGATTTCG ACGTAGCAGA GATCAAGAAG
ATCGCCCGGG TAGACACATT CATCGGTAAA CTCGTCTACT ACGACTACAT GTCATTTGGC
GTTGCGAGCT ACATCTTCGA GAAGAGAGTG AAGAGGTGCG CTGGCTTAAA CGGTGCGGCG
ATGGCTTTCA CGAGGAAAGC TCTCAAGGAG CTTGGCGGTT ACAGAAACGT GGTTCTAGAA
GACATGGATA TAGGCTTTAG GAGCTTCTTC CACGGGTTCA GGTACAAGTA CATCTGGGAT
ACCGAGGTCG TGGTAGACCC TCCCTCATCT CTCAGAGAGT GGCTTAACCA GAGGCTAAGG
TGGTCTGTGG GTGCTTGGAC CTGGATAGAT GACTACGTGT TCCACTTCTC GAAAATAGCG
AGCATCGATT ACGCGCTGGA GAGCTTCGCT GCGCTTTTCG CAATGTTTCC CGGAGGAATC
GTCTACGCGT CTATACTACT CGCAGAGGGG CTACCGCTGT TGAAGCTTGG ACTGCTCGCA
GGATCCACAG TCGGCGGACT CTTCGCGCCG CTCGTACCGG TTCTCGCCAT CTACGAAACT
GTATCGATGT TCCTCCCGCC TCTACCATTA TCCCTTGTAG CCATTGCGGT TGCTTATTCC
GCCTTGGTAG TACCCATCGC GTACAGGATA GGCTACAAAG TCAAGCCGCA ACACTTCGCT
ACGTATATCC TATTCTACTC CACCCTCTGG TTCACGGTTA TGCTGGCAGG GTTCATAAGA
GTGTTCGTAT TCCGAAAGAG GGACGTCACC GGGTGGCAAC TCTAG
|
|---|
| Protein sequence | MSSSERARVS VIVTVYRHAR RLRSLLEALC NQETSFPVEV IVVADEPDEE VLGILREKAC
VKSLVSENRR GKVRALNEAI SLSQGDVLIF LDNDVTVQDR KFVEKIYKWL QDFDVAEIKK
IARVDTFIGK LVYYDYMSFG VASYIFEKRV KRCAGLNGAA MAFTRKALKE LGGYRNVVLE
DMDIGFRSFF HGFRYKYIWD TEVVVDPPSS LREWLNQRLR WSVGAWTWID DYVFHFSKIA
SIDYALESFA ALFAMFPGGI VYASILLAEG LPLLKLGLLA GSTVGGLFAP LVPVLAIYET
VSMFLPPLPL SLVAIAVAYS ALVVPIAYRI GYKVKPQHFA TYILFYSTLW FTVMLAGFIR
VFVFRKRDVT GWQL
|
|---|
| |