Gene Tpen_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0076 
Symbol 
ID4601901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp59056 
End bp59916 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID639772830 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_919489 
Protein GI119718994 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTG GCTTTATAGG AACAGGGGCC ATGGGTTTTC CAATGGCGGC CCGCTTAGCG 
AGGACTGGAC ACGAGCTATT CGTCTGGAAC CGGACAATAG AGAAGGCTCG ACCGCTAGAG
CAGTACGGGG CTAGGGTAGC CTCTAGCCTC GACGAGCTTT CTAGGGTAGC CGAGGTGGTG
TTTGTAATGG TTTCCGACGA CGAGGCTTCC CGCGAGGTGC TAAGCGCCGT CCTGAGGGAG
GGGCGCCCGA GGATAATAGT CAATCACAGC ACGGTATCCC CGATGTACAC CAGGGAGGCG
GTAGAGGAGG CTAAGAGGAG GGGCGTCGAA TACCTAGCCA TACCCGTCAT GGGAGGTCCC
TCCGACATCG AGAGGGGAGA GGGCGTGTGC ATAGTTGGTG GGCGCGAGGA GGTTTTCCGC
GAGGTAGAGC CCCTTACCTC CGCCTACTGC AAGGAGCACG TGCTCGTTGG ATCACAGGAA
AATGCCTCCG TGATAAAGCT CGCGCTTAAC AGTATGTACT TCTCGGCTTT GGAGGCGCTC
GCAGAGGCCC TGCTCCTGGT AGAGGCTTGG AACGTGGAGC CGAAGGTTTT CTTCGACGCG
GCGAGCAGGC TCTGGCTGAG GGTCGTAGTG GACAGGTACG CCAAGAGGTT GCTAGACGAG
AAGTACCCTA CAAGCTTCCA GCTACGGCTT GCCGCGAAAG ACCTCCACTA CGCTGTTTTC
TCGGGTTACC ATAAGGGGCA ACCGCTACCA ATGCTCTCGG AGCTCGCGAA GACATTCCTG
GAAGCTTCGA CGATAGGGGG GCTGGGAAGA AGGGATTACA CAAGGATCTA CTACTTCTTG
AAAAGGGGCT CAACGGGCTA G
 
Protein sequence
MRLGFIGTGA MGFPMAARLA RTGHELFVWN RTIEKARPLE QYGARVASSL DELSRVAEVV 
FVMVSDDEAS REVLSAVLRE GRPRIIVNHS TVSPMYTREA VEEAKRRGVE YLAIPVMGGP
SDIERGEGVC IVGGREEVFR EVEPLTSAYC KEHVLVGSQE NASVIKLALN SMYFSALEAL
AEALLLVEAW NVEPKVFFDA ASRLWLRVVV DRYAKRLLDE KYPTSFQLRL AAKDLHYAVF
SGYHKGQPLP MLSELAKTFL EASTIGGLGR RDYTRIYYFL KRGSTG