Gene Tpen_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0068 
Symbol 
ID4601056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp51871 
End bp52473 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content55% 
IMG OID639772822 
ProductABC transporter, permease protein 
Protein accessionYP_919481 
Protein GI119718986 
COG category[S] Function unknown 
COG ID[COG4721] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGAAG AAAAACTCAG AGTAGAAGAA CTGGTGCTAA CAGCCGTTCT ATCGGCAATC 
ATAGGGGCTG TGTTCCTTGT ATGGTCTAAC GTAGTCTGGG GTGCATCGAA GCTGGTTCTC 
GGGCTTACGC TTACACCGAT TATCTACGGG ATGTGGTTCA TAGGGGCAAC CGTGCCTGCC 
TACATCGTGA GAAAACCGCT AGTAGCTCTT CTCGGCGAGT TCCTGGCAGC CGTGCTAGAG 
CTATTCTACG GGTCTCAGTT CGCCTCCACG GTTCTACTCT ACGGCTTCAT GCAGGGGCTC 
ATGTCCGAGC TCGTATTCTT CGCCACTAGG TACAAGAGGT GGGACTGGGC GACAATGGCT 
CTCGCAGGAG CGGCGCCCGC GCTGTGGGCT GCCCCCGCGG ACACCGTGCT CTACGGTATA 
ACCAACCCCC TGTCTCCCGG CCAAAGGGTA GTTTTCTGGA GCCTCTACTT CGTGAGCGGA 
GCCTTGATCG CCGGGGTACT CGTTAAAGCT TTGATAGACT ACGTTGCAAA GAGCTCTTCG 
CTGCTAGACT ACTTCGCCGT CGGAAAATCG GTGAAAAAGA TTGGCGGAAG TACTAGTCAA 
TAA
 
Protein sequence
MREEKLRVEE LVLTAVLSAI IGAVFLVWSN VVWGASKLVL GLTLTPIIYG MWFIGATVPA 
YIVRKPLVAL LGEFLAAVLE LFYGSQFAST VLLYGFMQGL MSELVFFATR YKRWDWATMA 
LAGAAPALWA APADTVLYGI TNPLSPGQRV VFWSLYFVSG ALIAGVLVKA LIDYVAKSSS 
LLDYFAVGKS VKKIGGSTSQ