| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0053 |
|---|
| Symbol | |
|---|
| ID | 4600533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 39606 |
|---|
| End bp | 40943 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639772806 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_919466 |
|---|
| Protein GI | 119718971 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCGGC TTAAAAGAGA GCTTGGGCTG GGCTACGCGA CGCTGTTCGG CGTTGGGTTG
ATACTCGGCG CCGGTATATA CGTCTTGATC GGGAGGGCTG CGGGCATCGT GGGCGACGCT
GTGTGGGCTA GTGTCGCGTT CTCCGGCGTC ATAGCCGTTG CGACGGCTTT TTCTTACGCG
GAGCTTTCCT CTATCTTCGC GAAGGCTGCG AGCACGTATA CCTACGTGAG GGAGGCTTTC
CCGGGGGCTG GGCTTCTGGC TTTCTTCGCC GCGTGGATGC TGTTCTTCGG CGGTGTCGCG
GGGGCGGCTA CGGCGGCGCT GGGCTTTGCC GGGTACTTCT CCAGGCTGGC GGGGCTGGGG
GAGGGCTGGG TGGTCCCGGT CACCGTGGCC CTGCTCGCCG TGCTGTCTGT GCTGAACTGG
TGGGGGATTA AGGAGTCGGC TTTCCTGAGC GCTGTCTTCA CGGTGATAGA GGCGGGCGGG
CTCGTGCTCG TGGTGTTGCT GGGCTTCCTC TTCCCGGCGA GGAGCCCCGG CTACCTCTCC
TTCAACCCCT CCGTCGACCC CGTGATGGCT GTACTCGTGG GCGCCGCCGT GTTCTACTTC
GCGTACACGG GCTTCGAGTA CCAGCCGACG CTCAGCGAGG AGACCGTGGA CCCCGAGAGG
GTTATCCCGA AGTCCATAGT CCTAGCGGTC TCCGTGACGA CGTTGCTGTA CCTGCTCGTC
TCCCTGTCTG TCGTCAGGCT TATGAGCTGG GAGGAGCTCG GCGCCAGTAA GGCCCCGATG
GCTGACGCGG CTTCGAGGGC GTGGCCCCCC GCGTTCCACC TCTTGATGTT CATAGCCCTC
TTCGCCACGA CTAACACCTC GCTCGGCTTC CTCGTCTCGG CCTCGCGGCT AGCCTACGGG
CTGGCGGAGG AGGGGGTTGC GTGGAGCGGC TTCGGGAGGG TTGACGGGTG GAGGAGGACT
CCTCACGTAG CCGTCGCCTT CACGGGTGTT CTCGCCGCCC TGCTCGTCTT CGCGACGGAC
TACCTGCCCA GCGTCACCGG GTGGAGGCTG AGCTTCGGGG GGCAGGAGTA CCAGCTGATA
GACCTCGTCG GGAAGACTGC CAGCCTGGCT GTTCTCCTCG CGTTCTTCGT CGTGAACGCC
GCCGTGGTCG CCTTGAGGAG GAGGGAGGGC CTCTCGAGGC GCTTCAGGGT TCCGCTCAAC
GTCGGCGACT TCCCCGTGTT GCCCGTGCTG GCGGACATAC TCATAGCCGT GTTCGTCGCT
CTGAGCTTCT GGGACTGGAT CGTCTGGCTG AGCACAGCCC TCGTAGCCGC GCTGGGGCTC
CTGCTCTACA AGCGCTGA
|
|---|
| Protein sequence | MSRLKRELGL GYATLFGVGL ILGAGIYVLI GRAAGIVGDA VWASVAFSGV IAVATAFSYA
ELSSIFAKAA STYTYVREAF PGAGLLAFFA AWMLFFGGVA GAATAALGFA GYFSRLAGLG
EGWVVPVTVA LLAVLSVLNW WGIKESAFLS AVFTVIEAGG LVLVVLLGFL FPARSPGYLS
FNPSVDPVMA VLVGAAVFYF AYTGFEYQPT LSEETVDPER VIPKSIVLAV SVTTLLYLLV
SLSVVRLMSW EELGASKAPM ADAASRAWPP AFHLLMFIAL FATTNTSLGF LVSASRLAYG
LAEEGVAWSG FGRVDGWRRT PHVAVAFTGV LAALLVFATD YLPSVTGWRL SFGGQEYQLI
DLVGKTASLA VLLAFFVVNA AVVALRRREG LSRRFRVPLN VGDFPVLPVL ADILIAVFVA
LSFWDWIVWL STALVAALGL LLYKR
|
|---|
| |