| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0047 |
|---|
| Symbol | |
|---|
| ID | 4601186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 36543 |
|---|
| End bp | 37196 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639772800 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_919460 |
|---|
| Protein GI | 119718965 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTTCCT TGGGTAGCGT CAAGGTTCTC GGGAACCCGG TGCTACAGGA GATACTCGGC
AAGCTGAGAT CCAGGGATAC TCCGCGCAGG GAGTTCAGGG AGCTGCTGTT CAAGGCAGGC
GTGTTCGAGG CGTACGAGAT AGCAGAGGAG CTCCCCACCG AAGAGTGCTC CGTCGAGACA
CCGCTCGGAC GCAGGGCTCC CTGCGTCAGG GTTACTGGAA AACTGGCGAT AGTCGCTGTC
CTCAGGGCCG CGCTACCGAT GGCGATGGGG ATGCTGGAAG TCTTCCCCGA CGCCGCGCTG
GGCTTCGTCG CCGCGAAGCG CTTAGAGGCC GACGCGCCGC CGCGGGACTG GAGGCTCGAG
GTCTCCGTTC CCTACGTCTC CATGCCGCCG GACGCCGAGA ACCTGGTAAT AGTAGACCCC
ATGCTCGCAA CAGGCTCCAC GCTGGCGAGC GTGATTGAGA GGCTGAAGGG AGGCGGCTAC
TCCTACGGGA GGCTCTACGT AGCCACGGTG ATATCCACGG AGCAGGGGAT AAGGAGGGTT
TTATCCGTCG AGCCGGAGGC CAGGATCTAT ACCCTCAGCG TGGACCCGGA GCTCAACGAT
AAAGCCTTCA TAGTGCCCGG GCTCGGCGAC GCCGGGGACA GGGCTTTCGG CTGA
|
|---|
| Protein sequence | MVSLGSVKVL GNPVLQEILG KLRSRDTPRR EFRELLFKAG VFEAYEIAEE LPTEECSVET
PLGRRAPCVR VTGKLAIVAV LRAALPMAMG MLEVFPDAAL GFVAAKRLEA DAPPRDWRLE
VSVPYVSMPP DAENLVIVDP MLATGSTLAS VIERLKGGGY SYGRLYVATV ISTEQGIRRV
LSVEPEARIY TLSVDPELND KAFIVPGLGD AGDRAFG
|
|---|
| |