Gene Tpen_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0046 
Symbol 
ID4600416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp35568 
End bp36461 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID639772799 
Producthypothetical protein 
Protein accessionYP_919459 
Protein GI119718964 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATAC ACCCGGAGTG CGTGCTCTGC ATCTACAGGA CGAGGGCTGG GGAGGTGCTG 
GCGTCCAACC TCTCCGACGA GGCGAAAGTG GAGGCTCTGG GCAAGCTCAC TGTTTTCTAC
GGCGGGCTCG TGGAGCCGTC GTCCTCCACG GTCGTCCTGG CGTGGAAGGC TTTCAGGAAG
GTCAAGGAGC TGTTGGGAGC CGAGGACCCC TACAGGTATT TCAAGGAGCA GAGCCACGCG
GCGGCAATGA GCGTTGTCGA GAGGCTCGCG GCGAGGGCTG AGGGGCTGGA GGGCTACGAG
AGGTTCAAGT ACTTCCTGTC GCTGAGCGTC GCGGCGAACC TCGTGGACCC GGGGTCCCCG
ATGGGGGTTT CGCCGGAGCA GCTCCTCGAG AAGGCCTCCT CGCTGAGGTT CGCGAGGGAC
GAGACGGACA GGCTCTACCT AACGCTCCTG CAGAGCTCTA GGGTCACGTA CCTGCTGGAT
AACTGCGGCG AAGCGGTGTT CGACGGGCTC GTCCTGAGGG AGCTCAGGAG GATGGGAATC
CAGCTCAAGA TAGTGGCGAA GGGTGCTCCC TACCAGAACG ACGTGACGCA CGACGACGCC
CTGAGGATGG GCTTCCAGGA GCTCGGCGAG GTCGTGAGCA CGGGGAGCGA TTTTCCCGGG
GTGGTCCCGG GCTACGTCTC GGAGGAGGCT GTGAAGGCCC TCGAGTGGGC AGACGTCGTG
ATATCGAAGG GCATGGCTAA CTTCGAGGCT TTCCTGATGA GCCCGCCGAA GACCGCGGTA
TTCGTAGCTT TCGTGGCAAA GTGCAGGCCC ATAGCGCAGG CAGCCAGGGT GAACCCCGGC
GACGCCGTCG CCGCCTTCCT GAGGTACCCT CAAGGGCTTA GGCAGTCCCT TTGA
 
Protein sequence
MRIHPECVLC IYRTRAGEVL ASNLSDEAKV EALGKLTVFY GGLVEPSSST VVLAWKAFRK 
VKELLGAEDP YRYFKEQSHA AAMSVVERLA ARAEGLEGYE RFKYFLSLSV AANLVDPGSP
MGVSPEQLLE KASSLRFARD ETDRLYLTLL QSSRVTYLLD NCGEAVFDGL VLRELRRMGI
QLKIVAKGAP YQNDVTHDDA LRMGFQELGE VVSTGSDFPG VVPGYVSEEA VKALEWADVV
ISKGMANFEA FLMSPPKTAV FVAFVAKCRP IAQAARVNPG DAVAAFLRYP QGLRQSL