| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0035 |
|---|
| Symbol | |
|---|
| ID | 4601383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 25762 |
|---|
| End bp | 26838 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639772788 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919448 |
|---|
| Protein GI | 119718953 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.101929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGTTG TGGCGCTACT TGAAGGCTGG TACGCGTCGA TAGCGAGAAG CGGGGAAGCC
TTCAGGCTGA CTCCGAACGA GTGGAAAGTC CTGGTATCCG TCGTGAACTC TACGACGGTC
TCGCGCGTAT CGGAGCAGGC GAAGCTACCC TACAGCACTG TGATAGACGT TATGAGGAGG
CTCTCGGGGA ACGGTCTCGG GATACACTTC ATACCGTACT TCGACCTAGC GGGCCTGAGG
AAAGTCTTCG CGTTGATAGA GGGTGCTCCC ATTTCCGGGT ACCCCCTCTA CACTACAAAC
GTTTACAGGC TCATCGGGAG AGGTTTCTTC ACGGGGGTTC TGGGTCTTGT CCCGGACTAC
CTGGTCAACG AGTTCTTCGC TAGCCTGCCG CGGGAGCCCG TCGCTACGGT GGTCGGGGAT
GAGTACAGGC ACTGGGCTCC AACGGGGAGG CTAACGAGGT ACGTCGCGGC GCACGGCATA
GTAGTCCCCG CCTACGACCA GCTGGAGGAT GTGCTCTACG CGTCGAGGGG ACCCGTGACG
AGGAGGGAGA AGAAGTGGGT GGACTGGGTG GACGTGCTGA TAGTCTACTT CAAGATGAAG
TACGCGTTTA CGAAGCTGAG CGACGTCTAC TCCCTGGCGA AGAGCGTTTT CGGCACGGCT
CCCCCCAGCA GGCAGCTGAT GAGCTACCAT TACAGAACCC ACGTCTCGCC CCTATGGTCC
TACAACGGCG TGAGCTTCAG GATAGACAGG CACCTCGCGC CCGAAAGGGT TTACGTTCTC
CGGGGTAACG CGAGCAAAGT CGCCGCCAGG ACGCTTATCG AGGCACCCTT CTTCTTCGAA
GCGCTTGTGA ACGAGGAGTC TTCCGTCCTC CTCGCGCAGA CCCCGTGCTA CATGTCCCCC
CTTGTATACA GGGTTCTTGC CGAGACGCGC GTGGACCTTC CCTACGGCGA GCTCTTAGTA
GCCGAGTCCT GGAGCTTCGA GTGGCTTACT AGCGACGCGG TGAAGCATTA CAGGGACCAC
AACGAGTGGC TCCACCCATC TGTGAGCGTG AGGATGCTCC CACCCGATGC AAAGTAA
|
|---|
| Protein sequence | MPVVALLEGW YASIARSGEA FRLTPNEWKV LVSVVNSTTV SRVSEQAKLP YSTVIDVMRR
LSGNGLGIHF IPYFDLAGLR KVFALIEGAP ISGYPLYTTN VYRLIGRGFF TGVLGLVPDY
LVNEFFASLP REPVATVVGD EYRHWAPTGR LTRYVAAHGI VVPAYDQLED VLYASRGPVT
RREKKWVDWV DVLIVYFKMK YAFTKLSDVY SLAKSVFGTA PPSRQLMSYH YRTHVSPLWS
YNGVSFRIDR HLAPERVYVL RGNASKVAAR TLIEAPFFFE ALVNEESSVL LAQTPCYMSP
LVYRVLAETR VDLPYGELLV AESWSFEWLT SDAVKHYRDH NEWLHPSVSV RMLPPDAK
|
|---|
| |