| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0024 |
|---|
| Symbol | |
|---|
| ID | 4601317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 18674 |
|---|
| End bp | 19213 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639772777 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919437 |
|---|
| Protein GI | 119718942 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCGA GAAGGATAGC GGCCGTGGCT GTCTTCACCT CGACGGCCGT TGTCTTCAGG
GTCGCGAAGA ACCTCGTTAC GACAGTCCAG TTTGTAAACA TTCCTCTAGC CATGGCGTTT
GTCTCCTCTG CTATCCTTGG CTATAAGGAG GGCTTCCTAG TAGGCTTTCT CTCGTATGTC
CTCTCGGATA TGCTGATAGG ACCAGGCTTC TGGACTCTCG TGAACCCCTT CCTCGCGGGA
GCTTTCTCCG CTGTGTTCGG CTTCTCTTAT AGGCGTGGGC TGGAGAAGAC CTACCTATTT
GTGTCGGCAT TTCTATCGTG CTTTCTTTTC GACGTGACGA CATCAGTTCT TTTTTACATG
ATCTTCGGTC TAAAGCCTCT GGACGCGCTG GTCTTCGGTC TGCTAGGGCT ATTCGTGCCT
GTGGTTGGAG GCTTCCTGGT CGGTGTGGGG CCTTTAACGG AGTTTTCCAC GTCGGCGCTG
GCAGTGGCGC TTCTAGAAGC GCTGGAGAGG AGACTAGGGA AAAACATAAA TATTGGATAA
|
|---|
| Protein sequence | MDARRIAAVA VFTSTAVVFR VAKNLVTTVQ FVNIPLAMAF VSSAILGYKE GFLVGFLSYV
LSDMLIGPGF WTLVNPFLAG AFSAVFGFSY RRGLEKTYLF VSAFLSCFLF DVTTSVLFYM
IFGLKPLDAL VFGLLGLFVP VVGGFLVGVG PLTEFSTSAL AVALLEALER RLGKNINIG
|
|---|
| |