| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0021 |
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| Symbol | |
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| ID | 4600487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 16955 |
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| End bp | 17656 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639772774 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_919434 |
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| Protein GI | 119718939 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.191967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGGG CGGTTTTCTT CGACATGGGA GGGGTGCTCG TATTCGACAG AGGGTTTGCG
CACCATCTCG CCAGGAACGT CAGTCTGGCT CTACGCGAAG CAGGGCTGGA ATACTCCGAG
GAGGAGGTGC TCAGAGCCTG GAAGGAGTCA AGTGTGCACG GTGACGAGCT GGAAACCTGG
GACCTTGTCA GATCCATGGT GTTGCTTAGA AAGCTGGGCG TAACCCCGAA ACCCCTGCTC
GCAGAGAAAG TGTACAAGGC TGTGCTCGAG AGCTACGTTC AAGGCTTCTC GCTGGACGAA
GAGGCTGAGC ACGCGCTGAG CCTGTCCCGT AGCCTAGGCT TCACCGTGGG GCTAATAACC
AACGTTGGGA GCTACGAGAT CGTGCGGAGG AGGCTTGAGG AAGCCGGGCT CCTGAAGTAC
GTAGACGTCA TTGTAGCCTC GCAGGCTGTT GCCTGGAAAA AGCCTTCACC GAGGATATTC
GAACTAGCGT GCTACCTGGC CGGCGTCGAG CCGGGCAACG CCGTCCACGT GGGCGACGAC
CCACGCATAG ATGTGGAGGG CGCCAAGAAA GCCGGGCTCA GGGCCGTACA AGTGCTGAAA
GCCGGGCCTC CGAGAAGCCC CTACGCTGAT GCGTGGGTCA ACTCCGTAGG AGAAGTTCCA
GGGATTCTAG AAGACTGGGT CTCCAAGGGG CTTTTTCGCT GA
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| Protein sequence | MTRAVFFDMG GVLVFDRGFA HHLARNVSLA LREAGLEYSE EEVLRAWKES SVHGDELETW
DLVRSMVLLR KLGVTPKPLL AEKVYKAVLE SYVQGFSLDE EAEHALSLSR SLGFTVGLIT
NVGSYEIVRR RLEEAGLLKY VDVIVASQAV AWKKPSPRIF ELACYLAGVE PGNAVHVGDD
PRIDVEGAKK AGLRAVQVLK AGPPRSPYAD AWVNSVGEVP GILEDWVSKG LFR
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