Gene Tpen_0008 details

Gene Information

• Locus tag: Tpen_0008
• ID: 4601128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 6756
• End bp: 7313
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639772761
• Product: hypothetical protein
• Protein accession: YP_919421
• Protein GI: 119718926

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.166637
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCCTCG TAGCCCTAAG CGCCGCCGTC TATGGAGGGC TACTCGCGGC TACAGCCCCC 
ATAACCATAG TACCCGGCTT CACGTGGTTG CGCCCTGGCA ACGCTCTCGC TCCGCTCTTC 
GGAATGTTCT TCGGCATACC CGGGTGCCTC GGAGCAGCGA TAGGCAACCT ACTGGCAGAC 
ATACTTTCAG GGTACTTCGG GGTAGGCTCT TTCGGAGGCT TTATAGGGAA CTTCCTGATA 
GCCTACATAC CCTTCAAGTT CGTCAGGGAT CACAGCTTTG GTAGCGCGTC CTCGATAGGA 
GAGTTCTACA TATGGGGCGT CATAGTCCAA GCCTTCGTGA GTGCCATCTA CATATGCTGG 
TGGCTCGACG TGATGCAGAG CGTCGTAGGG CTACCTGTAT TCGTGATATG GGCGGTTATA 
GCGACCTCGA TACTCATAAA CAACATCACC GTTAACGCCG TCCTCTCGCC AATCCTCGGC 
GTGATACTCT TCCCGCTAGT AAAGTCCAGG GGTCTCTACT GGAAGGACAG AGTAATGCCG 
CAGAAATCCA CGGCGTAA 

 

Protein sequence

MALVALSAAV YGGLLAATAP ITIVPGFTWL RPGNALAPLF GMFFGIPGCL GAAIGNLLAD 
ILSGYFGVGS FGGFIGNFLI AYIPFKFVRD HSFGSASSIG EFYIWGVIVQ AFVSAIYICW 
WLDVMQSVVG LPVFVIWAVI ATSILINNIT VNAVLSPILG VILFPLVKSR GLYWKDRVMP 
QKSTA