Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4968 |
Symbol | |
ID | 4595339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 301532 |
End bp | 302650 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772750 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_919410 |
Protein GI | 119714268 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0119707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGG ACGGCCCAGG CTTGTTCGAA CTCTCGCCCG GGAGGAGCGG CCGGTTCGAG CCGGCACGGC TGACCCAGGC GCGAGCGCGC CTCGGCGTCA GCAAGGCCGA CCTGGCTTCC TCCGCCGGCG TCTCGGCCGC GGCGATCGGC CAGTATGAGG CCGGCGTGAC CTCGCCACGC CCTGAGGTCG TCGATCGGCT GGCGGAGGCT CTCGAGGTCC GTCCCGGGTT CTTCGACGTC GGCCGCCCGC TGGCGCGCAT CGACACGGTG AACGCGCACT TCCGTAGCCT GAGGTCAGTC CGCGTCAGTG ATCGCCAGAA GGCCTTGGCC ACCGCCACGT TCGTGTGGGA GATGACCTTC GCGCTTGAGC GGTACGTCAA GCTGCCCGAG GTGGACCTCC CTTCCCTCCC GGTCGGGACA ACGCCGACCG AGGCCGCGGC GGCCCTGCGG CGGCACTGGG ACTTGCCTGA CGGGCCAGTG AAACACCTTG TCGCCACGGC GGAGTCGCAC GGCGTCGTCG TTGCTGTGCG CCCGCTACGC GAGATCGACG CCGTCGACGC CTTCTCTGCG GTCATCGTCG ATCGGCCGGT CATCATCACC ACGCCGCGGC GCAGCGAGAA CGTGTTCCGG CACAGGTTCT CAATCGCCCA CGAGATCGGG CACCTGTTGC TGCACGGCGA CTCCGGCGAG TACAGCGCGG CGGTCGAAAA GGAGGCCGAC GAGTTCGCCG CCGCGTTCCT GACGCCGGCG GCCGCCATGG ACGCGGCGCT GCCGCAGCGG CTCGAGCTGG CGGCACTGGA CCGGCTCGGT CGGACGTGGG GCGTTTCGCC GAAATCGCTG GTGCGCCGGA TGGTCGAGCG CGGGCGCACC ACCGAGTCGT CGGCACGGCG GGCCTACCAG CGCCTGGCCA TGACCGACGA CCCGTCGGCC GACCCGACCA GGGCGTACCC GGGCGAAATG CCATCACTGC TGAAGAAGGC CGCGGACATG GCGGGCGACC TCGGCGCGGG AGTGCCTGCC CTCGCCGAGG CGCTGAAGCT CAGGCCCGTG CAGGTGCGTG ACCTGCTCGG CGACGCCGAC CAGCGGCCGG TCCTACGCCT TGTCGACGGC CGGGGCTGA
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Protein sequence | MPEDGPGLFE LSPGRSGRFE PARLTQARAR LGVSKADLAS SAGVSAAAIG QYEAGVTSPR PEVVDRLAEA LEVRPGFFDV GRPLARIDTV NAHFRSLRSV RVSDRQKALA TATFVWEMTF ALERYVKLPE VDLPSLPVGT TPTEAAAALR RHWDLPDGPV KHLVATAESH GVVVAVRPLR EIDAVDAFSA VIVDRPVIIT TPRRSENVFR HRFSIAHEIG HLLLHGDSGE YSAAVEKEAD EFAAAFLTPA AAMDAALPQR LELAALDRLG RTWGVSPKSL VRRMVERGRT TESSARRAYQ RLAMTDDPSA DPTRAYPGEM PSLLKKAADM AGDLGAGVPA LAEALKLRPV QVRDLLGDAD QRPVLRLVDG RG
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