| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4926 |
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| Symbol | |
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| ID | 4595293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 257412 |
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| End bp | 259136 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639772709 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_919369 |
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| Protein GI | 119714227 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.28198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGTTC ATCATCGGAA CATGGACGAC AACGGTCCAC TCGCCGTGGG GCGGTCGTCG
CTGGCTCGCG GGGACTGGGT GGCAGCGAAG GCGGCCTTTG AGACCGCCTG GAACGATCAG
GGATCCGCGG ACGCATTGGA CGGCCTCGGC CGCAGCCTGT GGTGGCTGGG CGACGCTCCG
GGTGCACTGG ATGTGCGGTC GCGGGCTTTC GCCCTGCTGC GTCGCGAGGG CCGTGACCAC
GAAGCGGCCG CCGTCGGCAT CTGGCTCGCC CGACAGTACG CCGGCCTTTT CCACCGCACG
GCGATGGCCG AGGGCTGGGT TGCCCGGAGC CGCTCCCTGG TCGCCGATCT CGCAGACCCG
GGCAGCCTCG AAGGATGGAT GGCCCTGGTG GAATCCGAGG CCGCCGCGCT GAATCTTGCG
ATCGCCCACG CCGAGCGCGC GGTGGTCGTC GCGCGCAAGC ACCGTGATGT AGACCTCGAG
ATCGTCGCCC TGGCCCGCCT GGGCGCCTGC CGGGTCGGCA CCGGCGCAGT CGCTGCGGGT
TGGTCGGACC TGCAGCAGGC GATGACCGCG GCCGTCTCGG GCGAGGGCCA CGACGTCGCG
TACGTCGGCG AGGCGCTGTG CACGCTGCTG GAGGTCTCGG GCTGGCTCGG CGACCCAGGG
ATGGTGGAGC CATGGGCCCA GCAGCTGGCC GAGTTCCGAT CGGCGTACGC GTTCGGCCCG
TTGCTCCCGT TGGAGACCAC GTCGGGCCCG GACCTGATCT CCGCCTTCTG CACCAGCTGC
TGCGGAGGGG TCTACCTGGT CACCGGACGC CTGGACGTGG CCGAGCGAGA ACTTGCCGAC
GCGGTGACCC AGCTGGCCAC GACCGGGTGC CGGCCGCGGT GCCTCCACCC GGTCGCGAGG
CTGGCCGAGC TGCGGGTGCT CCAGGGCCGG CTCGAGGAGG CGGAGGCGCT GCTGGTCGGA
TTCGAGTCGG AGTGGGAGTG CGCGTTGGTG GCGGCGGCTC TGGACCTGGT GCAGGGTCGA
CCCAATCGGG CGGTGGCCGG ACTTGTCGCG GCACTCGAGG GCCTCAGGGC CGCGACGGTC
GTGTCCCTGC CACTGCGGGC GCAGCTGGTC GACGCCGCAC TCGCGGTATC TGACCTGACC
CTCGCCGCGG TCACCGCTGG AGAGCTTGCC GAGGTGGCGG TGGCCACGGG TACGACGCTC
CACAAGGCGC AGGCGGATTT CGCCGCGGGC AAGGTCCTGC TGGCAGAAGG TGACTTCGAC
GCATCCGCGC GGCTGCGGGC GGCCGCGCGG GCATTCGCGG AGTGCGGAGC CCCGTTGGCG
GCCTGCCGCG CCCGGATGGC GCTGGCGAGG TCGCTGGCGG ACCGCGACCG GGGTGTGGCC
GTGACCGAGG CCAGGAGCGC CCTGCAGGCG TTCGACCGGA TGGGAGCGAC GTCGGAGGCC
GACCAGGCTG CTTCCTTTCT GCGCGGATTG GGGATCAAGG GCCGCACGGG CCCCAGGGAC
GGTGTTGTCC TGAGCCGCCG GGAACAGGAG GTGCTGAGCC TGGTCGTCGA GGGACTCTCC
AACGCCGAGA TCGCCGAGCG GCTCTTCATC AGCGTCAAGA CCGCGGGACA CCACGTGAGC
AACATCCTGA CCAAGCTCGG TGTCCGCAGC CGCACCGAGG CGACGGCGTA CGCGCTGCTC
CATCCCGCCG CACCCGGGCC CTCGGCAACC CAGGCAGCGA AATAG
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| Protein sequence | MGVHHRNMDD NGPLAVGRSS LARGDWVAAK AAFETAWNDQ GSADALDGLG RSLWWLGDAP
GALDVRSRAF ALLRREGRDH EAAAVGIWLA RQYAGLFHRT AMAEGWVARS RSLVADLADP
GSLEGWMALV ESEAAALNLA IAHAERAVVV ARKHRDVDLE IVALARLGAC RVGTGAVAAG
WSDLQQAMTA AVSGEGHDVA YVGEALCTLL EVSGWLGDPG MVEPWAQQLA EFRSAYAFGP
LLPLETTSGP DLISAFCTSC CGGVYLVTGR LDVAERELAD AVTQLATTGC RPRCLHPVAR
LAELRVLQGR LEEAEALLVG FESEWECALV AAALDLVQGR PNRAVAGLVA ALEGLRAATV
VSLPLRAQLV DAALAVSDLT LAAVTAGELA EVAVATGTTL HKAQADFAAG KVLLAEGDFD
ASARLRAAAR AFAECGAPLA ACRARMALAR SLADRDRGVA VTEARSALQA FDRMGATSEA
DQAASFLRGL GIKGRTGPRD GVVLSRREQE VLSLVVEGLS NAEIAERLFI SVKTAGHHVS
NILTKLGVRS RTEATAYALL HPAAPGPSAT QAAK
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