Gene Noca_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4916 
Symbol 
ID4595288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp247862 
End bp248695 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID639772699 
Productalpha/beta hydrolase fold 
Protein accessionYP_919359 
Protein GI119714217 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.503338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA GCAGCGTGGC TTCAGGGGTG TACCACGCGC AGATCAACGG CGTCCGGATC 
GCCTACCAGG CCGTCGGCAG GGGCGAGCCC CTCGTGCTCG TCCACGGGTC TTGGGGTTCG
CACCACAACT GGGACCCGGT CGTCCCGGGC CTGTCGGCCC GTCACCGGGT GGTCAGCTAC
GACCGACGAG GGCACAGCGA GAGCGAACGG CCAGCGGGGC AGGGCACGTT TGCCGAGGAC
GTCGCCGACC TGGCTGCACT GGTCGAGACC CTAGACGTCG CGCCGGCGTG GGTGGTCGGG
AATTCGGTCG GGGCTGTCAT CACCCTGCAG CTCGCCGCGG CGAGGCCGGA CCTGCTGCGT
GGTGTCATCG TGCACGAGCC GCCACTGCGG GGACCGCTGT CGGAGGGTGG CGCGGACGAG
GCCCTCCGGA TGGTGCTGGA ACTGATCCGC GCGGGCGACC ACGCCGGCGC CGCGGAGCGG
TTCGTCGATG ACGTGGCGTT CGGGCGCGGC GCTTGGGCGC GGCTGCCGGA GCGGATGCGG
GCGACGATGG TCGACAATGC GCCGACCTAC CTCGACGAGG AGCTGGCGCC GGATTCGCGG
ACCGTTGACG AGGTCGCCCT CGCTCGTTAC CGAGGGCCGG TCCTGGTCAC CTCGGGCGGT
CAGAGCCCGC CGATCTTCCA GCCGGTCCTC CGGCATCTGG CACGACTGCT GCCGCAGGGT
CACCGCCTCC AGTACGCGGG CGCGGGCCAC ATCCCGCACG CGACGCATCC AGAGGAGTTC
GTGAGCACGG TCCTCGGGTT CGTGTCGGAT CCCGGTCTCG GGGGCGCGTC GTGA
 
Protein sequence
MSTSSVASGV YHAQINGVRI AYQAVGRGEP LVLVHGSWGS HHNWDPVVPG LSARHRVVSY 
DRRGHSESER PAGQGTFAED VADLAALVET LDVAPAWVVG NSVGAVITLQ LAAARPDLLR
GVIVHEPPLR GPLSEGGADE ALRMVLELIR AGDHAGAAER FVDDVAFGRG AWARLPERMR
ATMVDNAPTY LDEELAPDSR TVDEVALARY RGPVLVTSGG QSPPIFQPVL RHLARLLPQG
HRLQYAGAGH IPHATHPEEF VSTVLGFVSD PGLGGAS