| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4913 |
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| Symbol | |
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| ID | 4595284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 245204 |
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| End bp | 246907 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639772696 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_919356 |
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| Protein GI | 119714214 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.203956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAA ACGCTCCACT CGCCGCGGGG CGGTCGGCGC TGGGTCGAGG AGACTGGGCG
GCAGCGAACG GGTCCTTCAA GGCGGCATGG GACGACAAGG AATCCGCTGA CGCGCTTGAC
GGCCTCGGCC GCAGCATGTG GTGGCTGGGC GACGCGCCGG GTGCGCTGGA TGCGCGGTCT
CGGGCCTTCG CGCTTCTGCG TCGCGAGGGC CGCGACCGAG AAGCGGCCGC GGTCGGGATC
TGGCTCGCCC GACAGTACGC CGGACTCCTC CACCGCACCG CGATGGCCGA GGGCTGGGTC
GCCCGAACCC GCTCCCTGGT CGCCGACCTC GCAGACCCGG GCAGCCTCGA AGGATGGCTG
GCCTTGGTGG AATCCGAGGC CGCCGCGCTG AATATTGCGA TCGCCCACGC CGAGCGCGCG
GTTGCCGTCG CGCGTAAGCA CCGTGATGTA GACCTCGAGA TCGTCGCCCT GGCCCGCCTG
GGCGCCTGCC GAGTCGGCAC CGGCGCAGTC GCTGCGGGTT GGTCGGACCT GCAGCAGGCG
ATGACCGCCG CCGTCTCGGG CGAGGGCCAC GACGTCGCGT ACGTCGGCGA GGCGCTGTGC
ACGCTGCTGG AGGTCTCGGG CTGGCTCGGC GACCCAGGGA TGGTTGAGCC GTGGGCCCAG
CAGCTGGCCG AGTTCCGCTC GGCGTACGCG TTCGGCCCGT TGCTCCCGTT GGAGACCACT
TCGAGCGCGG ACCTGATCTC CGCCTTCTGC ACCAGCTGTT GCGGCGGGGT CTACCTGGTC
ACGGGACGCC TGGACGTGGC CGAGCGGGAG CTTGCCGACG CGGTGACCCA GCTGGCCACC
ACCGGGTGCC GGCCGCGGTG CCTGCACCCG GTCGCGAGGC TGGCCGAGCT GCGCGTGCTC
CAGGGCCGGC TCGAGGAGGC CGAGGCGCTG CTGGTCGGAT TCGAGTCCGA GTGGGAGTGC
GCGGTGGTGG CGGCGGCCCT GGACCTGGCA CTGGGTCGGC CCCACCGCGC GGTGGCCGGG
CTCGTCGCCG CACTGGAGCG CCTTCAGGCG GCGGCGGTCG TGTCCGTGCC ACTGCGGGCG
CAGCTGGTCG ACGCCGCACT CGCCGCAGGC GACCGGAGCC TGGCCGAGCG CACCTCGGGA
GAGCTCGCCA ACGTGGCGGC GGCTACCGGG ACGACGCTCC ACCGGGCGCA GGCGGACTTC
GCCGCCGGCA AGGTTCTCCT GGCCCAAGGT GATCCCGACG CACCCGCGCG GCTCCGGGCG
GGCGCCCGGG CGTTCGCGGA GTGCGGAGCC CCGTTGGCGG CCTGCCGCGC CCGACTGGCG
CTGGCGAGAT CGCTGGCGGA CCGGGACCGG GGGGTCGCGG TGGCCGAGGC CAGGAGCGCC
CTGCAGGCGT TTGACCGGAT GGGGGCTACC TCGGAGGCGG ATCAGGCGGC GGCCTTTCTC
CGGGAACTCG GGATCAAGGG ACGAACGGGC CCCAGGGACG GCGCCGTGCT GAGCCGTCGC
GAGCAGGAGG TGCTGGGCCT GGTCGTGGAG GGACTCTCCA ACGCCGAGAT CGCCGAGCGG
CTGTTCATCA GCGTCAAGAC CGCGGGACAC CACGTGGGCA ACATCTTGAC CAAGCTCGGT
GTCCGCAGCC GCACCGAGGC GACGGCGTAC GCGCTGCTCC ACCCTGTCGC GCCCGCTCCC
GTGGCGAACC GGGCGGCCAA ATAG
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| Protein sequence | MDGNAPLAAG RSALGRGDWA AANGSFKAAW DDKESADALD GLGRSMWWLG DAPGALDARS
RAFALLRREG RDREAAAVGI WLARQYAGLL HRTAMAEGWV ARTRSLVADL ADPGSLEGWL
ALVESEAAAL NIAIAHAERA VAVARKHRDV DLEIVALARL GACRVGTGAV AAGWSDLQQA
MTAAVSGEGH DVAYVGEALC TLLEVSGWLG DPGMVEPWAQ QLAEFRSAYA FGPLLPLETT
SSADLISAFC TSCCGGVYLV TGRLDVAERE LADAVTQLAT TGCRPRCLHP VARLAELRVL
QGRLEEAEAL LVGFESEWEC AVVAAALDLA LGRPHRAVAG LVAALERLQA AAVVSVPLRA
QLVDAALAAG DRSLAERTSG ELANVAAATG TTLHRAQADF AAGKVLLAQG DPDAPARLRA
GARAFAECGA PLAACRARLA LARSLADRDR GVAVAEARSA LQAFDRMGAT SEADQAAAFL
RELGIKGRTG PRDGAVLSRR EQEVLGLVVE GLSNAEIAER LFISVKTAGH HVGNILTKLG
VRSRTEATAY ALLHPVAPAP VANRAAK
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