Gene Noca_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4888 
Symbol 
ID4595259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp220667 
End bp221230 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content70% 
IMG OID639772673 
Productdeaminase-reductase domain-containing protein 
Protein accessionYP_919333 
Protein GI119714191 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.600343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAC TGACCTTCGG CATGAACCTG AGCCTGGACG GCTACATCGC CGCGCCCGGC 
GACGACCTCG GCTGGAGCGT GCCGAGCGAC GAGCTGTTCC AGTGGTGGTC CGACCGGGTG
GCGGCGACGG GCCTGGCGCT GTACGGGCGC AAACTGTGGG AGACGATGAG CTCCCACTGG
CCGACCGCCG ACCAGCAGCC TGGCGCCACA CCGGCGCAGA TCGAGTTCGC CCGCCGCTGG
CGGGACATGC CGAAGGTGGT GTTCTCCTCG ACGACCAGCG CGGTCGACTG GAACGCCCGC
CTGGTCACCG GCGACGCTGT CGCCGAGATC ACCCGGCTCA AGACTGAGGA TGGCGGTCCC
ATGGACGTCG CCGGCGCCAC CCTCGCCGCG GCGGCCATGC GGGCCGGGCT GATCGACGAG
TACGCGATCG TCACCCACCC GGTCCTGGTG GGCGGCGGCA CGCCGTTCTT CACGGCCCTG
GACAACTGGG TGAACCTGAA CCTGGTGGAG ACCCGGACGT TTCCCGACGG CGTGCTCCTG
ACCAGGTACG AGACCAGGCA ATGA
 
Protein sequence
MRKLTFGMNL SLDGYIAAPG DDLGWSVPSD ELFQWWSDRV AATGLALYGR KLWETMSSHW 
PTADQQPGAT PAQIEFARRW RDMPKVVFSS TTSAVDWNAR LVTGDAVAEI TRLKTEDGGP
MDVAGATLAA AAMRAGLIDE YAIVTHPVLV GGGTPFFTAL DNWVNLNLVE TRTFPDGVLL
TRYETRQ