Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4885 |
Symbol | |
ID | 4595252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 216108 |
End bp | 217961 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772670 |
Product | hypothetical protein |
Protein accession | YP_919330 |
Protein GI | 119714188 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.925702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCC GCGCGGGGGG AGGACAACCC GCGACCCTGC CACCGGCCGG GTGGGCGCCG CGGCCACGCC TGGGACCCGA CGGTGAAAGT GTGTTGTTCC TCGACGAAAC CAGTGGACGC AGCACGCTGT TCGAGTTCAC CGATCTGCCG GTGGCCGAGC CGATCCGTCG GTGGCTGGCC GAGCGTGTCG CGGGCCAGTT CACCACCCGT TCGACGGTCA AACGATTGCC CACCGCCAGG TCGCTGGTGG ACACGGCCCG CCATTTCGCC GTCGTGCTAT CCGAGCACCC GGTCACCGTC CGGCGCCCGG AGGACGTCGT CGCCGAGCAC CTGCTGGCCT TCCGGCGCCG CTACGAGCAC CTGAAACCAC GAACCGTGAG CGGCTACGTC GAGAACCTGC GACGGCTGCT GCGCGACGAC GAGCGTCTCA GCCCCGACGC GCGGGCCGGG CTGGCGGCGA TCCGGGTACG CGCGATGAGT CGCCGCGACA TCACCAAGCG GGGCTACACC GAGGTCGAAT GGCAGGAGAT CCTGACCGCC GTACGACACG ACGTGCGGGC GGCCCGCGAC CGGATCCACG CTTCGTGGCG ACTGCTGGTC CGGTATCGGG CCGGTGAGCT TCCCACCGGT AGCGAGGACG TCACGCTCGG TCGGTTGTTG GATGGCTTCG AACGCACCGG TCAGCTGCCC CGCAAGGTCG ATACGAACGG CACCCCGGAC GTGCACCGGT GTGGCGGACT GGTCAAGGTC GCCGGCATGC TGTGTCTGTC CCCGGACGAG CTGGCCGCGT TCGCGCTGCT CCTGGTCTCC TTGACCGGGC AGAACTACGG CACGATCGCG GCCTGGCCGG CGGCGCACTT CCGTCCCGAC GGCGGGCTGA CCGACGAGGG CCTCGCCTTG GTCGAGTCGT GCAAGCCGCG CCGCGGACCC GACCGGGAAC ACATGGTCAT CGCGCTGGAA GACCTCATCA CCGGCGGCGA CCGGGAGCAC CGGTGGTCCC GGTCGCCGCT GCGGGTGTAC CGGATGCTGC TCGACCTCGG CGACACCGCC CGCCGCCTGA GCAATAGCCG GGGACTCTTC ACCGGCCGGA TCGCCAAGAG AACCGTTCAT ACTCCAAGCC CGTGGATCAC CGCGCTGACC AGCCAGCATG TGCAGCGGTG GGCCGCCGCC CGCGGCTTCC CCACCGCCAC CTTCGCGGTA CCCGGCGGGA AGCCGGTGGT CTCGGTGAGG CGGCTGCGGC TGACCGCGAT CGAACGGCGG CGTCGCCCCG TGGCGCACAC CGCGGCCACC ATGCGCGATA CCTACCTGAT GCCCCACCCC GCCGTCCAGG CCGAGTCCCA CGCCGTCGTC GCGGCCACCC TGGACAGCGA GGTGAGCAAG GCCCGCGACC ATGCCCGGGT GCCGGTCTTC ACCCAGAACT TCGTAGACCT GGCCCGGAGC GACCCACAGG CCGCCGCCCA GCAGGCCGGC ATGAGCACGA AGCAGTTGGC CGGCCTCCTG GATGGCAGCA AGGACACCGT CCTGGCGTCC TGCCAAGACC ACCGGGCCAG CCCGTACGAC CCGCCCGGGG CCGCCTGTTC GGCGTCGTTC CTGGCCTGCC TGGACTGCGC TAACGCCCGC GCCCTGCCGC ACCAGCTACC GATCCAGCTG GCCGCGATCG ACGCACTGGA GCAGTTGCGT CCACACCTGC CCCCGGCCCT GTGGGCGCGC CGGTACGCAC CCCGCCTGGA CCAGCTGCGA GACATCACCG CCGGCTTCCA GCCCGCCGAG ATCGACCACG CCAGGGCCGG GATCTCCGAC GGGCACCGCC AACGAGTCAG CGACCTCCTG GAGGGCCGAT GGGACCTGCA CTGA
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Protein sequence | MSGRAGGGQP ATLPPAGWAP RPRLGPDGES VLFLDETSGR STLFEFTDLP VAEPIRRWLA ERVAGQFTTR STVKRLPTAR SLVDTARHFA VVLSEHPVTV RRPEDVVAEH LLAFRRRYEH LKPRTVSGYV ENLRRLLRDD ERLSPDARAG LAAIRVRAMS RRDITKRGYT EVEWQEILTA VRHDVRAARD RIHASWRLLV RYRAGELPTG SEDVTLGRLL DGFERTGQLP RKVDTNGTPD VHRCGGLVKV AGMLCLSPDE LAAFALLLVS LTGQNYGTIA AWPAAHFRPD GGLTDEGLAL VESCKPRRGP DREHMVIALE DLITGGDREH RWSRSPLRVY RMLLDLGDTA RRLSNSRGLF TGRIAKRTVH TPSPWITALT SQHVQRWAAA RGFPTATFAV PGGKPVVSVR RLRLTAIERR RRPVAHTAAT MRDTYLMPHP AVQAESHAVV AATLDSEVSK ARDHARVPVF TQNFVDLARS DPQAAAQQAG MSTKQLAGLL DGSKDTVLAS CQDHRASPYD PPGAACSASF LACLDCANAR ALPHQLPIQL AAIDALEQLR PHLPPALWAR RYAPRLDQLR DITAGFQPAE IDHARAGISD GHRQRVSDLL EGRWDLH
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