Gene Noca_4885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4885 
Symbol 
ID4595252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp216108 
End bp217961 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content71% 
IMG OID639772670 
Producthypothetical protein 
Protein accessionYP_919330 
Protein GI119714188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.925702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCC GCGCGGGGGG AGGACAACCC GCGACCCTGC CACCGGCCGG GTGGGCGCCG 
CGGCCACGCC TGGGACCCGA CGGTGAAAGT GTGTTGTTCC TCGACGAAAC CAGTGGACGC
AGCACGCTGT TCGAGTTCAC CGATCTGCCG GTGGCCGAGC CGATCCGTCG GTGGCTGGCC
GAGCGTGTCG CGGGCCAGTT CACCACCCGT TCGACGGTCA AACGATTGCC CACCGCCAGG
TCGCTGGTGG ACACGGCCCG CCATTTCGCC GTCGTGCTAT CCGAGCACCC GGTCACCGTC
CGGCGCCCGG AGGACGTCGT CGCCGAGCAC CTGCTGGCCT TCCGGCGCCG CTACGAGCAC
CTGAAACCAC GAACCGTGAG CGGCTACGTC GAGAACCTGC GACGGCTGCT GCGCGACGAC
GAGCGTCTCA GCCCCGACGC GCGGGCCGGG CTGGCGGCGA TCCGGGTACG CGCGATGAGT
CGCCGCGACA TCACCAAGCG GGGCTACACC GAGGTCGAAT GGCAGGAGAT CCTGACCGCC
GTACGACACG ACGTGCGGGC GGCCCGCGAC CGGATCCACG CTTCGTGGCG ACTGCTGGTC
CGGTATCGGG CCGGTGAGCT TCCCACCGGT AGCGAGGACG TCACGCTCGG TCGGTTGTTG
GATGGCTTCG AACGCACCGG TCAGCTGCCC CGCAAGGTCG ATACGAACGG CACCCCGGAC
GTGCACCGGT GTGGCGGACT GGTCAAGGTC GCCGGCATGC TGTGTCTGTC CCCGGACGAG
CTGGCCGCGT TCGCGCTGCT CCTGGTCTCC TTGACCGGGC AGAACTACGG CACGATCGCG
GCCTGGCCGG CGGCGCACTT CCGTCCCGAC GGCGGGCTGA CCGACGAGGG CCTCGCCTTG
GTCGAGTCGT GCAAGCCGCG CCGCGGACCC GACCGGGAAC ACATGGTCAT CGCGCTGGAA
GACCTCATCA CCGGCGGCGA CCGGGAGCAC CGGTGGTCCC GGTCGCCGCT GCGGGTGTAC
CGGATGCTGC TCGACCTCGG CGACACCGCC CGCCGCCTGA GCAATAGCCG GGGACTCTTC
ACCGGCCGGA TCGCCAAGAG AACCGTTCAT ACTCCAAGCC CGTGGATCAC CGCGCTGACC
AGCCAGCATG TGCAGCGGTG GGCCGCCGCC CGCGGCTTCC CCACCGCCAC CTTCGCGGTA
CCCGGCGGGA AGCCGGTGGT CTCGGTGAGG CGGCTGCGGC TGACCGCGAT CGAACGGCGG
CGTCGCCCCG TGGCGCACAC CGCGGCCACC ATGCGCGATA CCTACCTGAT GCCCCACCCC
GCCGTCCAGG CCGAGTCCCA CGCCGTCGTC GCGGCCACCC TGGACAGCGA GGTGAGCAAG
GCCCGCGACC ATGCCCGGGT GCCGGTCTTC ACCCAGAACT TCGTAGACCT GGCCCGGAGC
GACCCACAGG CCGCCGCCCA GCAGGCCGGC ATGAGCACGA AGCAGTTGGC CGGCCTCCTG
GATGGCAGCA AGGACACCGT CCTGGCGTCC TGCCAAGACC ACCGGGCCAG CCCGTACGAC
CCGCCCGGGG CCGCCTGTTC GGCGTCGTTC CTGGCCTGCC TGGACTGCGC TAACGCCCGC
GCCCTGCCGC ACCAGCTACC GATCCAGCTG GCCGCGATCG ACGCACTGGA GCAGTTGCGT
CCACACCTGC CCCCGGCCCT GTGGGCGCGC CGGTACGCAC CCCGCCTGGA CCAGCTGCGA
GACATCACCG CCGGCTTCCA GCCCGCCGAG ATCGACCACG CCAGGGCCGG GATCTCCGAC
GGGCACCGCC AACGAGTCAG CGACCTCCTG GAGGGCCGAT GGGACCTGCA CTGA
 
Protein sequence
MSGRAGGGQP ATLPPAGWAP RPRLGPDGES VLFLDETSGR STLFEFTDLP VAEPIRRWLA 
ERVAGQFTTR STVKRLPTAR SLVDTARHFA VVLSEHPVTV RRPEDVVAEH LLAFRRRYEH
LKPRTVSGYV ENLRRLLRDD ERLSPDARAG LAAIRVRAMS RRDITKRGYT EVEWQEILTA
VRHDVRAARD RIHASWRLLV RYRAGELPTG SEDVTLGRLL DGFERTGQLP RKVDTNGTPD
VHRCGGLVKV AGMLCLSPDE LAAFALLLVS LTGQNYGTIA AWPAAHFRPD GGLTDEGLAL
VESCKPRRGP DREHMVIALE DLITGGDREH RWSRSPLRVY RMLLDLGDTA RRLSNSRGLF
TGRIAKRTVH TPSPWITALT SQHVQRWAAA RGFPTATFAV PGGKPVVSVR RLRLTAIERR
RRPVAHTAAT MRDTYLMPHP AVQAESHAVV AATLDSEVSK ARDHARVPVF TQNFVDLARS
DPQAAAQQAG MSTKQLAGLL DGSKDTVLAS CQDHRASPYD PPGAACSASF LACLDCANAR
ALPHQLPIQL AAIDALEQLR PHLPPALWAR RYAPRLDQLR DITAGFQPAE IDHARAGISD
GHRQRVSDLL EGRWDLH