Gene Noca_4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4879 
Symbol 
ID4595256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp211331 
End bp212077 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID639772664 
Productphage Gp37Gp68 family protein 
Protein accessionYP_919324 
Protein GI119714182 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCA AGACCGGGAT CGAGTGGACA GAGGTCACCT GGAACCCGAC CACAGGTTGC 
GACCGGATCA GCGAAGGCTG CGACAACTGC TACGCGCTCG CCATGGCCAA GCGGCTCAAG
GCGATGGGCT CCGAGCGCTA CCAAGCGGAC GGCGACCCTC GCACTTCCGG GCCAGGATTC
GCGCTCACTC TCCACCCCGA CGCACTCGCA CAGCCGTTCC GCTGGGGCGG CAGTCGATTG
GTCTTCGTCA ACTCGATGAG CGACCTGTTC CACGCGAAGG TTCCGATCTC GTTCGTCCGC
GACGTCTTCG ACGTCATCGC ACGCACGCCG CAGCACACAT ATCAGTTGCT GACCAAGCGG
TCTGCGCGCC TACCCAAGGT CGCCGACAAG CTGGATTGGC CGCCGAACCT CTGGCTGGGC
GTCAGCGTCG AGAACTCCGA CCACGTCTAC CGCGTAGACC ACCTGAGGCA GGTGCCCGCG
GCGGTGCGCT TCCTCTCCTG CGAACCGCTC ATCGGCCCGC TGCCCGACTT GGATCTAACT
GGCATCGGCT GGGTGATCAC GGGCGGCGAG TCCGGTCCAA GAGCACGACC ACTCGACCCC
GACTGGGTAC GAGAGATCCG AGACAACTGT GTGACGTCAG GCGTGCCGTT CTTCCACAAG
CAATGGGGCG GCCGGACACC AAAGGAACAC GGTCGTCACC TCGATGGCAC CTTGTGGGAT
GAGATGCCCA AGCTCGTCAC CGCTTAA
 
Protein sequence
MRTKTGIEWT EVTWNPTTGC DRISEGCDNC YALAMAKRLK AMGSERYQAD GDPRTSGPGF 
ALTLHPDALA QPFRWGGSRL VFVNSMSDLF HAKVPISFVR DVFDVIARTP QHTYQLLTKR
SARLPKVADK LDWPPNLWLG VSVENSDHVY RVDHLRQVPA AVRFLSCEPL IGPLPDLDLT
GIGWVITGGE SGPRARPLDP DWVREIRDNC VTSGVPFFHK QWGGRTPKEH GRHLDGTLWD
EMPKLVTA