Gene Noca_4864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4864 
Symbol 
ID4595233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp194190 
End bp194585 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID639772649 
Productalkylhydroperoxidase 
Protein accessionYP_919309 
Protein GI119714167 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCGTCTACCA CCAGACCACG CCCGCCTTGG CTGCCCGACG CCGCGAGCTC 
GCGCCGGACA CCCATCACGC ATTCAACGAG TTCAGCCGCG CCGTTTTCGG CGCCGGCGCC
CTGGATCGCC GCACCAAGCA GCTGATTGCG GTCGCGGTTG CCCATGTCAC GCAGTGTCCG
TACTGCATCG AGGGACACAC GAAACTTGCG CACCGCGAGG GAGCCAGCCC TGAAGAGATC
ATGGAGTCAA TCTGGGTCGC AGCCGAGATG CGGGCTGGCG GCGCCTACGC GCACTCGACC
CTGGCGCTCC ATGCACTCGA CGCACTCGAC GCACTCGACT CAGAACCGTC CGACCAAAGT
ACCGCCAACC TGGAAGTCCG TCGGCAAGCG CGGTAG
 
Protein sequence
MTDTVYHQTT PALAARRREL APDTHHAFNE FSRAVFGAGA LDRRTKQLIA VAVAHVTQCP 
YCIEGHTKLA HREGASPEEI MESIWVAAEM RAGGAYAHST LALHALDALD ALDSEPSDQS
TANLEVRRQA R