Gene Noca_4863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4863 
Symbol 
ID4595244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp192928 
End bp194148 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID639772648 
Productaminotransferase 
Protein accessionYP_919308 
Protein GI119714166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR01885] ornithine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA CGACCAGCCA GCACATCGAG CTCGCGCAGC GGTTCGCAGC GCACAACTAC 
AACCCGCTGC CGGTGGTCGT CACCCACGCC CAAGGTGCCT GGGTCACCGA CATCGAGGGC
CGCCGCTACC TGGACTGCCT GGCCGGCTAC TCGGCCCTGA ACTTCGGCCA TCGACACCCC
GAGCTCATCG CGGCGGCCTG TGAGCAGATG AAGAGGCTGA CAATGACCAG CCGAGCGTTC
CACAACGACC GGATGGGACC GTTCTGCGCG GCCCTGGCGG ACCTGACGGG GATGGACGCC
GTCTTACCGA TGAACACCGG GGCCGAGGCA GTCGAAACCG CGATCAAGAC CGCCCGACGT
TGGGGAAACC GCGTGAAGGG AGTCCGGGAC GGCCGCCAGC GGATCGTCGT CGCCGAAAGC
AACTTCCACG GACGCACCAC CACCATCGTG GGGTTCTCCT CCGACGACGA AGCACGAGAC
GGCTTCGGCC CCTTCACCCC TGGCTTCGAC GTGGTCCCGT ACGGCGACAC CGGCGCCCTG
CGTGCCGCCG TCGGGCCGGA CACGGTCGCC GTCCTGCTTG AACCGATCCA GGGCGAGGCT
GGCGTCATCG TCCCACCCGC GGGATACCTG CGCGACGTCC GGGCGATCTG TGACGGCCAG
GGCGTTCTGT TCATCGCCGA CGAGATCCAG TCCGGGCTGG GACGCACCGG CACGACGTTC
GCGTGCGAAG GCGAGCAGGT CGTCCCCGAC GTCTACGTGC TCGGCAAGGC CCTCGGAGGC
GGGATCCTCC CGGTCTCGGC CATCGCCGCG AACCGTGCCG TCCTCGACGT GATCACGCCG
GGTAGTCACG GGTCGACCTT CGGGGGCAAC CCCTTGGCCT GCGCTGTGGG GCACGCAGTG
GTCCAACTCC TCGTCACCGG CGAGTATCAG GCTCGCGCGC AGATGCTCGG CGCGCGCCTC
CTGGATGGAC TCCAGTCGCT GACCGGGGAC GGCGTGCTCG CGGTGCGAGG GCGCGGCCTG
TGGGTGGGTA TCGACGTGGA CCCGGCGCTG GCTAGTGGTC GGCAGCTAGC CGAGCGGCTC
CTCCATCTCG GTCTGCTGGT CAAGGACACC CACGGCTCCA CCGTGCGCCT CTCCCCACCG
TTGGTGATCA AGCGGGACGA GGTGGACTGG CTAGTCGACC GGTTCGCCCT CGCGCTGGCG
AGCCTGAGCG CCAAGAGTTA G
 
Protein sequence
MTLTTSQHIE LAQRFAAHNY NPLPVVVTHA QGAWVTDIEG RRYLDCLAGY SALNFGHRHP 
ELIAAACEQM KRLTMTSRAF HNDRMGPFCA ALADLTGMDA VLPMNTGAEA VETAIKTARR
WGNRVKGVRD GRQRIVVAES NFHGRTTTIV GFSSDDEARD GFGPFTPGFD VVPYGDTGAL
RAAVGPDTVA VLLEPIQGEA GVIVPPAGYL RDVRAICDGQ GVLFIADEIQ SGLGRTGTTF
ACEGEQVVPD VYVLGKALGG GILPVSAIAA NRAVLDVITP GSHGSTFGGN PLACAVGHAV
VQLLVTGEYQ ARAQMLGARL LDGLQSLTGD GVLAVRGRGL WVGIDVDPAL ASGRQLAERL
LHLGLLVKDT HGSTVRLSPP LVIKRDEVDW LVDRFALALA SLSAKS