| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4858 |
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| Symbol | |
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| ID | 4595239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 187761 |
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| End bp | 190481 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772644 |
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| Product | 2-oxoacid dehydrogenase subunit E1 |
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| Protein accession | YP_919304 |
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| Protein GI | 119714162 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0734587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCTG ACCTTCAAGG CTGGCGACAC GTCAGCGATC GGCTGGTCCA GCCGAGAGAC
ATCGACCCCG ACGAGACCCA GGAATGGGTC GAGTCGCTCG ACGCGGTGGT TGACCACGCC
GGTCAGGCGA GGGCTCGTGA GTTGTTGCTG CGCCTGCAGC GGCGGGCTCA GCGTCGAGGC
GTGCTGATGC CCGGGTGGGG CCCGTCCGAC TACATCAACA CGATTCCCAC TGCTGCCGAG
CCTGCGTACC CCGGCGATGA GGATCTCGAA CGGCGGATCC GTGCGGCCGT GCGGTGGAAC
GCCGCGGTGA TGGTGCACCG TGCGCAACGC CCGGGGCTCG GTCTAGGAGG TCACCTGTCG
ACGTACGCGT CGACTGCCAC GTTGTTCGAG GTCGGGTTCA ACCACTTCTT TCGCGGCCCG
GACGCGGATG GAGATGGGGA CCAAGTCTAC TTCCAGGGCC ATGCGTCACC GGGGGTTTAC
GCGCGCGCCT TCCTCGAGAA CCGCCTGGAC GAGGGCCAGC TGGACGGCTT TCGCCAGGAA
CTCTCCCACG GCGGCCTAGG AGCTGGCCTT CCGTCCTACC CGCACCCGCG TCTCATGCCC
ACCTTCTGGG AGTTCAGCAC CGTCTCGATG GGGCTGAGCC CGATCAACGC GATCTACCAG
GCTCGCTTCA ACCGCTACCT GCGCGACCGG GGGATCAAGG ACACCAGTCG CCAACACGTG
TGGGCCTTCC TCGGGGATGG CGAGATGGAC GAACCCGAGG CGCTGGGCGC ACTGGGCGTG
GCCGCTCGGG AAGAGCTGGA CAACCTGACG TTCGTGGTCA ACTGCAACCT GCAACGGCTG
GACGGCCCGG TGCGGGGAAA CGGCAAGATC ATCCAAGAGC TCGAGTCCTA CTTCCGTGGC
GCCGGTTGGA ACGTCATCAA GGTCATCTGG GGACGCGAGT GGGACCGGCT CTTAGACACT
GACATCCAGG GCGCCCTGGT CGATCTGATG AACGTCACGC CAGACGGGGA CTTCCAGACC
TTCAAGGCAG AGTCCGGCCA CTTCGTGCGC GAGCACTTCT TCGGACGGGA TCCGCGTGCC
CTCCGGCTGG TCGAGACCCT GACGGACGAG GAGATCTGGG ACCTCAAACG CGGGGGCCAC
GACACCCACA AGGTCTTCGC CGCCTACGAC GCCGCACTGC GTCACGTCGG CCAGCCGACC
GTCATCTTGG CCCAGACCAT CAAGGGATAC GGTCTCGGTT CTCACTTCGA GAGCCGCAAC
TCCACCCACC AGATGAAGAA GCTCACCGTC GAGGACCTCA TTGAGCTACG CGATCGTCTG
CGTCTCCCGA TCCCGGACCA CCAGCTCGAC CATGACCTTC CGCCCTACTT CAAACCTGCC
GAGGGTTCAC CCGAGCTGGA ATACCTGGAG GAGTGCCGAC TCCGCCTCGG TGGGCACCTC
CCGAGCCGAC GCGTCCGCAG CCGGCCCCTC GTGCTGCCGG GCGACACGGC GTACGCGGTG
GCCACGCTCG GGTCCCACCA GCCGGTCGCC ACCACCATGG CCTTCGTCCG CCTGCTCCGC
AGCCTGATGA ACGACCCCGC GATCGGGCAT CGCTTCGTCC CGATCATCCC CGACGAGGCC
CGCACCTTCG GACTGGATGC GTTGTTCCCC ACCAAGAAGA TCTACTCTCC GCAGGGACAG
CACTATCTCT CGGTCGACCG TGGGCAGCTG CTGAGCTACC AGGAGGACAC CGCGGGGGTG
GTGCTGCACG AGGGACTGAC CGAAGCAGGC TGCACTGCCT CTTGGACCGC CGCGGGAACG
TCGCACGCCA CCCATGACGA GCCGATGATC CCGATCTATG TCTTCTACTC GATGTTCGGC
TTTCAGCGCA CCGGCGACCT GTTGTGGGCG GCAGCTGACC AGCTGACCCG AGGGTTCCTG
CTCGGTGCGA CCGCAGGCCG CACCACGCTC AATGGAGAAG GCTTGCAGCA TCAGGACGGA
CACTCCCAAC TTCTTGCTGC AACCAATCCT GCGTGCGTCT CCTACGACCC CGCCTACGCC
TACGAGATCG GCCACATCGT CCGCGACGGG CTACGAAGGA TGTACGGCGA GCCCGCGCTC
GGGGAAGACC CGGACGTCTT CTACTACCTC ACCCTCTACA ACGAGCCGAT CGTGCAACCC
GCCGAACCCG ACGACGTGGA CATCGAAGGA ATCCTCGCCG GCATGCACCG CATCTCGCCG
GCCCCGGCAA GTGAGCGGCC GGGCGCGCAG ATCCTCGCGT CGGGCATCGC GGTTCCCTGG
GCGCTGGAGG CACAAGCGAT GCTTCACGAC GATTGGGACG TGCACGCCGA CGTGTGGTCG
GTGACCTCGT GGAACGAGCT ACGCCGGCGG GCGCTCACCA TCGACGACTG GAACCACGTC
CACCCCGATG GGCCGCGCCG GGTCCCCTAT GTGACCAGGC GACTGCTCGG ACAGCGCGGG
CCGGTCGTAG CGGTGTCGGA CTGGATGCGC GCGGTGCCCG ACCAGATCGC CCCGTTCGTG
GACGCAGACT GGTCCTCGTT GGGCACAGAC GGGTTTGGCC TCTCCGACAC ACGCGCTGCG
CTCCGTCGGC ACTTCCGGGT CGACCCACCC TGGATCGTCG CGCGCGTGCT CGCCCACCTC
GCCCGCCAAG AGCAGGTCGA TCAGACCGCA CCAGCCAGGG CGATCAAGCG GTATCAGGCG
ACCTCCCTCC ATGCGGGCTG A
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| Protein sequence | MTADLQGWRH VSDRLVQPRD IDPDETQEWV ESLDAVVDHA GQARARELLL RLQRRAQRRG
VLMPGWGPSD YINTIPTAAE PAYPGDEDLE RRIRAAVRWN AAVMVHRAQR PGLGLGGHLS
TYASTATLFE VGFNHFFRGP DADGDGDQVY FQGHASPGVY ARAFLENRLD EGQLDGFRQE
LSHGGLGAGL PSYPHPRLMP TFWEFSTVSM GLSPINAIYQ ARFNRYLRDR GIKDTSRQHV
WAFLGDGEMD EPEALGALGV AAREELDNLT FVVNCNLQRL DGPVRGNGKI IQELESYFRG
AGWNVIKVIW GREWDRLLDT DIQGALVDLM NVTPDGDFQT FKAESGHFVR EHFFGRDPRA
LRLVETLTDE EIWDLKRGGH DTHKVFAAYD AALRHVGQPT VILAQTIKGY GLGSHFESRN
STHQMKKLTV EDLIELRDRL RLPIPDHQLD HDLPPYFKPA EGSPELEYLE ECRLRLGGHL
PSRRVRSRPL VLPGDTAYAV ATLGSHQPVA TTMAFVRLLR SLMNDPAIGH RFVPIIPDEA
RTFGLDALFP TKKIYSPQGQ HYLSVDRGQL LSYQEDTAGV VLHEGLTEAG CTASWTAAGT
SHATHDEPMI PIYVFYSMFG FQRTGDLLWA AADQLTRGFL LGATAGRTTL NGEGLQHQDG
HSQLLAATNP ACVSYDPAYA YEIGHIVRDG LRRMYGEPAL GEDPDVFYYL TLYNEPIVQP
AEPDDVDIEG ILAGMHRISP APASERPGAQ ILASGIAVPW ALEAQAMLHD DWDVHADVWS
VTSWNELRRR ALTIDDWNHV HPDGPRRVPY VTRRLLGQRG PVVAVSDWMR AVPDQIAPFV
DADWSSLGTD GFGLSDTRAA LRRHFRVDPP WIVARVLAHL ARQEQVDQTA PARAIKRYQA
TSLHAG
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