| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4848 |
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| Symbol | |
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| ID | 4595444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 180258 |
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| End bp | 181130 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772634 |
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| Product | patatin |
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| Protein accession | YP_919294 |
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| Protein GI | 119714152 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.939066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG CGTTCGTTCT TACCGGTGGC GGAAGCCTCG GTGCCGTCCA GGTCGGCATG
CTGCAGGCTC TTGCCGAGCG AGGTGTCAAG CCTGACCTGC TGATGGGTAC ATCCTGCGGC
GCGCTCAACG CCGCATGGGT GGCCGGACAC GGAATGTCGA GTGACTCGCT GACCGAGCTC
GCCGCGGTGT GGACCAGTCT GCGACGAAGC GACATCTTCC CCGTCGATGC CCGTCAGGTA
CTGCGCGGAC TCCTCGGCTT CAGCCCTGCC GTGACCACGA ATCGCAAGCT TCGCCAATTC
ATCGAGACCC ATTCGAGCAT CACCGACCTC TCCCAGGCGA ATGTGCCGAC CTACCTCGTC
GCCGCCGACC TGCTCAGCGG CCGCGACGTG CTGATCTCAA CCGGCGACCT CGCAACCGGT
GTCCTCGCAA GCTCCGCCAT CCCCGGCGTG CTACCGCCAG TGGAACATGC CGGGGCGCAC
CTCATCGACG GGGCGCTCGC GCCTCACACC GGCATTACCC AAGCCGTCGA CCTGGGCGCC
TCAGTTGTCT ACGTCCTTCC CACCGGCGCC GCCTGCGCAC TGTCTCGAGC GCCGCGAACC
GCGGCCGGAG TGGCGCTCCA CTCGCTCACC CTGTTGATCG AGCAGCGGCT CATCCACGAA
ATCGCCGCAA CGCAGGCCGC GACCACAATC AAGCTCCTCC CGCCACTGTG CCCACTGGCA
GTTTCAGCAG CCGACTTCAG CCACGCCAAG GAACTCATCA CACGCGCCCG CAGATCAAGC
CTTCAATGGA TCGACTCCGG CGGCACCGAG CTCCCTGACC CTGAACGGTT CCTCACACTC
CACCACCACG GCTCGGTCAG CATCGCCACA TGA
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| Protein sequence | MTTAFVLTGG GSLGAVQVGM LQALAERGVK PDLLMGTSCG ALNAAWVAGH GMSSDSLTEL
AAVWTSLRRS DIFPVDARQV LRGLLGFSPA VTTNRKLRQF IETHSSITDL SQANVPTYLV
AADLLSGRDV LISTGDLATG VLASSAIPGV LPPVEHAGAH LIDGALAPHT GITQAVDLGA
SVVYVLPTGA ACALSRAPRT AAGVALHSLT LLIEQRLIHE IAATQAATTI KLLPPLCPLA
VSAADFSHAK ELITRARRSS LQWIDSGGTE LPDPERFLTL HHHGSVSIAT
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