Gene Noca_4839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4839 
Symbol 
ID4595439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp169055 
End bp169840 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID639772626 
Productphosphosulfolactate synthase 
Protein accessionYP_919286 
Protein GI119714144 
COG category[S] Function unknown 
COG ID[COG1809] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.889971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACA AGCCCGACTT TCTCGATCTG CCGCCGCGCA CAGTCAAGCC CCGCACAACC 
GGGCTGACCC ATGTGCTCGA CAAGGGGCTG ACCGTATCTG CGCTCGACGC GTTGCTCGAG
CAGGCGGCCG ACTACATCGA CGTACTCAAG GTCGGCTGGG GCATCGCGTA CGTCGACCCG
CACATCAAGG AGCGCGCCGT CCTCTGTCGT CAAGCCGGGG TGACCCTGTG TCTGGGCGGG
ACCCTGCTCG AGGTGTGCGC GGCCCAGGGG CGGATCCCGG AACTGACCCG CTGGGCACAC
CGGATCGGCG TCGAAGCCGT GGAGGTGTCC AACGGTCTGG CACGAATGTC CTCGGACGAC
AAACGGGCCC TGGTCCGGGA ACTCTCAGGC GAGTTCATCG TGTTCGCCGA GACCGGAACC
AAAGACGGCG ACGCGCCGGT CACCGCCCAC CTCTGGGTCG ACGAGATGGA GGCCGACCTC
GAAGCCGGCG CGCGCCATGT CATCGCCGAG GGTCGAGAGA GCGGAACGGT CGGGCTCTAC
CACTCAGACG GCACCCCTCG GGTTGGCCTC GCCGAAGCGA TCGCCGCGAG GATGCCCCTC
GGGAAGGTCA TCTTCGAGGC GCCGACGAAG TCACACCAGA CCTGGTTCGT GCGCAAGTTC
GGCTCCGACG TAGGGCTTGG CAACATCGGG ACCGATGAGG TACTTGCCCT CGAGACGCTT
CGGCTGGGGC TCCGCGCCGA CACTGCACTC CTCGGCGCGC CAACGTCGGT CGGAGCACTC
GCATGA
 
Protein sequence
MHDKPDFLDL PPRTVKPRTT GLTHVLDKGL TVSALDALLE QAADYIDVLK VGWGIAYVDP 
HIKERAVLCR QAGVTLCLGG TLLEVCAAQG RIPELTRWAH RIGVEAVEVS NGLARMSSDD
KRALVRELSG EFIVFAETGT KDGDAPVTAH LWVDEMEADL EAGARHVIAE GRESGTVGLY
HSDGTPRVGL AEAIAARMPL GKVIFEAPTK SHQTWFVRKF GSDVGLGNIG TDEVLALETL
RLGLRADTAL LGAPTSVGAL A