Gene Noca_4834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4834 
Symbol 
ID4595429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp163615 
End bp164316 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639772621 
Productphosphoadenylylsulfate reductase (thioredoxin) 
Protein accessionYP_919281 
Protein GI119714139 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAC CCTCCGAGAT CAGCAGGCTT CGCTCGCTGG TGGCACAGCG CGCGCGCGAT 
CTGGAAGGCG CCTCCGCTGA GGCCGTGATC AGCTGGGCGC AGGAGACCTT CGGAGCCCGG
CTGTGCGCGA CGTCCTCGAT GGGCGACGTC GTCATCGTGC ACCAGGTGTC TCGGTACGCA
CCGGGTCTGG ATGTGCTCTT CCTGGATACC GGCTACCACT TCGCGGAGAC GCTGGCCTTT
CGTGAGCTCG TGTCGTCGTC GTACGACGTG AACGTGGTCG ACCTCCGACC GGAACGCAGC
GTCGAAGAGC AGTTGCAGCT CTGGGACCGC GACCTGTTCG ACTCCGATCC GGACGGTTGC
TGCCGGCTTC GGAAGGTCCT TCCCCTGCGG CGCGCACTGA CGGGGTATGA CGCGTGGGTC
ACCGGGATCA GGAGGGCGGA CTCCCCGCGG CGGGCGGAGA CTCCAGTGCT GGCGTGGGAC
GAGGTCAACC AGGTCGTGAA GGTGGCGCCT TTGGCGACCT GGACCCGCGA GATGGTGGAG
GGCTACCTCG AGGACCACGC ACTCCCCCGC AACCGGCTAA CGGAGCTCGG TTACACGTCG
ATCGGATGCC AACCCTGCAC CTCTCTGCCC ACCGGGCTGG ACCCGCGGTC TGGCCGGTGG
CCCGGGCTGC AGAAGACCGA GTGCGGACTC CATCGGACCT AG
 
Protein sequence
MKTPSEISRL RSLVAQRARD LEGASAEAVI SWAQETFGAR LCATSSMGDV VIVHQVSRYA 
PGLDVLFLDT GYHFAETLAF RELVSSSYDV NVVDLRPERS VEEQLQLWDR DLFDSDPDGC
CRLRKVLPLR RALTGYDAWV TGIRRADSPR RAETPVLAWD EVNQVVKVAP LATWTREMVE
GYLEDHALPR NRLTELGYTS IGCQPCTSLP TGLDPRSGRW PGLQKTECGL HRT