Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4831 |
Symbol | |
ID | 4595434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 160134 |
End bp | 161051 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772618 |
Product | CdaR family transcriptional regulator |
Protein accession | YP_919278 |
Protein GI | 119714136 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.558318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCAAGA ACCGGGGTCA GGGCCCTCCC GCGGCCGACG TACTCGGTGT GCTCGCGCTG GTCGATCCCG GCCAGCAAGC CGGTGAGCAG GAACAGATCG CCATAGAACA CGGCGCAACA GTGCTCGCCA TGGAGCTGGC TCGCCTCCGC AGCTTGGCTG AGACCGAGCT CCGCATCCGA CGCGACCTGG TGGACGAGCT GCTCACCGGG ACCGAGGAGT CGAGCGCACT GGCGCGCGGG CAGGCGCTGG GACACGACCT GGAGAAGCCG CACCGTGTAG TGGTCGTCGA AGGCCACGGG CGAGCCCACG ACAGCAATGC GTTCTTCCTC GCCGTACGAC GAGTCTCACG CCAGCTGCAC GCCGGGAGCC TTCTTGTAGC CCGAGGGGAG TCGGTCGTTG TCCTGTCCGA GGCCGACCTG GACTGGGAGA AGTTCCGCGG CCTGGTGATG ACAGAGCTCG GAGGTGGACG CTGCCGACTC GGCGTCGGCG ACTATTGTCA CGGCCCCAAA GACTTCCCAC GGTCCTACCG AGAGGCTCAG ATCGCCCTGC GCATGCAGCG TGTGGCCAAG GCGGAGGACC GCGCAACGTC GTACGCGGAT CTCGGCGTCT ACCGGATCCT CGCCGAGGTC GAGAACCCGA TGGCTGTCGA GCGGTTCGTG CGCCATTGGC TGAACGCGCT CCTTGAGTAT GACGCCCGCA AGGGCTCCGA ACTCGTCCAC ACCCTGAGTC GCTACCTCGA GTGCGGCGGG AGCTACGAGG CCACGGCCGC GGCACTGTCG GTCCACCGCA GCACCTTGAA GTACCGGCTC CAGCGGATCC GCGAGATCTC AGGCCACGAC CTGACCCACC CCGACACCGC CTTCAACCTC CAGCTGGCCA CTCGAGGCTG GCAGACCCTG CAAGGCCTGC AGAGCTGA
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Protein sequence | MSKNRGQGPP AADVLGVLAL VDPGQQAGEQ EQIAIEHGAT VLAMELARLR SLAETELRIR RDLVDELLTG TEESSALARG QALGHDLEKP HRVVVVEGHG RAHDSNAFFL AVRRVSRQLH AGSLLVARGE SVVVLSEADL DWEKFRGLVM TELGGGRCRL GVGDYCHGPK DFPRSYREAQ IALRMQRVAK AEDRATSYAD LGVYRILAEV ENPMAVERFV RHWLNALLEY DARKGSELVH TLSRYLECGG SYEATAAALS VHRSTLKYRL QRIREISGHD LTHPDTAFNL QLATRGWQTL QGLQS
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