| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4823 |
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| Symbol | |
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| ID | 4595404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 149733 |
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| End bp | 151424 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639772610 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_919270 |
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| Protein GI | 119714128 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCG CCGAACCCGA GCACCCTTTG ACCATTGAGG ACGCCGAACT GCGGGAGCAG
TTGTCGAACG TCCAGGGTCT GCTGATGCTT TCGATGTTGA TGACCCAGAG CGGTGACCCG
CAGAAGATCC TCCACCTCGC TGAGACCTCG GTCCCTTCGT TCGGGCCGTG CCACATCGTC
GGTGCACAGG TAGACGGGAA GTGGCTCCCG GCAGCTTCCG CGAAGTTGAG CCCGGAGATG
CAGGTGAGCC TGAGTGGCCA GCTGGCAAGA CTCTCATCGA CCCGTGCTGA GCTCACTCTT
CCTGACCGTG CGTGGGTCAA GGCTCTGCCG TTGCGGAGCA TGCAGAGCCA GGTCGGGTAC
CTGGTGATCG GGGCGGCAGC GCAACCGACG GGTAACCAGC TTTTCCTGCT TCAAGTCTTG
GCCCAGCAGA CCGGTATTGC CCTGATCAAT GCGCGACTCC ACGCCAAGGA GCGGGCAACA
GCGCAGGAAC TTCAAGGCGC CGTTGAGACC TTGGCGGAGA CAGTTCGAGC ACTTGAGCGA
ACTACGGAGA TTCACGTCAG GTTTACGCGG GTCGCGGCAA AGAGCGAAGG ACAGGAAGGC
ATCGCCCAGG CACTTCACGA GTTGACGGGG TTTCCTGTGG CTGTCGAGGA CCGCTTCGGG
AATCTACGAG CTTGGGCGGG CCCTCACCGG CCGGAGCCAT ACCCGAAGGA CCCGCAGGCT
CGGCGCGAGC AGATGCTCCG TCGGGCGTTG CGTGAGGGCC AGCCCGTGCG CGAAGGGGGC
CGGCTTGTCG CTATTGCGAA TCCTGCTGCT GATGTACTCG GCGTGCTCGC GCTGATTGAC
CCGGCCCAAC GGGCGGGAGA GCAGGAACAA ATCGCCATCG AACATGGAGC GACTGTGCTC
GCCATGGAGC TGGCTCGTCT CAGAAGCCTG ATTGAGACTG AGCTTCGGCT GCGACGGGAC
CTTGTTGATG AACTGCTGAG CGGCACCGAG GAGTCAAGCG CGCTGGAACG AGCGCAGGCG
CTCGGTCACG ATCTCGAGAA GCCGCACCGT GTGGTGATGA TCGAAGGCAA CGGTCGAGTC
CACGACAGTG GCGCCTTCTT CCTGGCCGTT CGACGCGCCG CCCGCCAAAT GCACGCTGGA
ACCCTGCTGG TGGCACGCGG AGAGTCGGTG GTCGTGCTTT CCGAGGCGGA CCTCGACTGG
GAGAAATTCC GCACCCTTGT GATCAAGGAG CTTGGCGGAG GGCGATGTCG AATTGGCGTC
GGCGACTACT GCCAGGGTCC CGGGGGATTT CCGCAGTCCT ACCGGGAGGC TCAACTGGCG
CTGCGGATGC AGGGCGTCGC GAAGGCGGAG GATCAGGCGA CGGTGTACGC CGACCTCGGC
GTCTATCGAA TTCTTGCGGA GGTTGAGAAC CCGGCCGCCG TCGAGCGGTT CGTTCGTCTC
TGGCTGAGTC CTTTGTTGGA CTACGACGCT CGGAAGGGCT CCGACCTCGT CCACACGTTG
AGTAGATACT TGGAGTGCGG CGGCAAGTAC GACGCAACGG CGATCGAGCT GTCCGTCCAT
CGCAGCACCC TGAAATACCG ACTCCAGAGG ATCCGCGAGA TCTCTGGCCA CGACCTGTCG
GATCCAGACA CCGCGTTCAA CCTCCAACTG GCCACCCGGG GCTGGCAGAC GTTGCAAGGC
CTGCAGGCCT GA
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| Protein sequence | MVSAEPEHPL TIEDAELREQ LSNVQGLLML SMLMTQSGDP QKILHLAETS VPSFGPCHIV
GAQVDGKWLP AASAKLSPEM QVSLSGQLAR LSSTRAELTL PDRAWVKALP LRSMQSQVGY
LVIGAAAQPT GNQLFLLQVL AQQTGIALIN ARLHAKERAT AQELQGAVET LAETVRALER
TTEIHVRFTR VAAKSEGQEG IAQALHELTG FPVAVEDRFG NLRAWAGPHR PEPYPKDPQA
RREQMLRRAL REGQPVREGG RLVAIANPAA DVLGVLALID PAQRAGEQEQ IAIEHGATVL
AMELARLRSL IETELRLRRD LVDELLSGTE ESSALERAQA LGHDLEKPHR VVMIEGNGRV
HDSGAFFLAV RRAARQMHAG TLLVARGESV VVLSEADLDW EKFRTLVIKE LGGGRCRIGV
GDYCQGPGGF PQSYREAQLA LRMQGVAKAE DQATVYADLG VYRILAEVEN PAAVERFVRL
WLSPLLDYDA RKGSDLVHTL SRYLECGGKY DATAIELSVH RSTLKYRLQR IREISGHDLS
DPDTAFNLQL ATRGWQTLQG LQA
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