Gene Noca_4821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4821 
Symbol 
ID4595423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp147308 
End bp147997 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID639772608 
Productphosphoadenylylsulfate reductase (thioredoxin) 
Protein accessionYP_919268 
Protein GI119714126 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA CAGAGCGGGA CCTCCAACGA CTCCAGGCTG TCGTCTTCGA GCACGCGGAG 
GAACTCGAAG GTGTATCCGC CGACTCAGTA GTGCGATGGG CACGGGACAC GTTCGGCACC
AAGTTGTGCG CGACGTCATC GATGAGTGAC GCAGCGATCA CGCACCTTGC GTCGTCGTGT
GCGCCCGGCC TCGACGTGCT GTTCCTTGAC ACCGGGTACC ACTTCCCGGA GACCCTCGCG
TTCCGCGACC AGGTGGCTGC AGCCTTCGAC GTGCGTGTCG TCGATCTCAG ATCCAAGCCT
GCCCCCGGCA ATCAGATTCC GCCATGGAGC ACCGATTCCA ACGATTGCTG CCGGCTCAGG
AAAGTCGTCC CGCTGCGCCA AGCCTTGGCA GGGTATGACG CGTGGTTGAC CGGGATCAGG
CGAGCGGAGT CGCCCAGTCG GTCGCAGACC CCTGTTGTGT CGTGGGATTC GCATAATCAG
GTAGTGAAAG TCGCACCCCT CGCAGCCTGG ACGGACGAAG CTCTCGCGGC ATATCTCCAT
GAGCACGCCC TGCCCGGCAA CCGGCTTACC GAGCTCGGCT ACCCGTCGAT TGGCTGCGAG
CCCTGCACAT CCTTGCCGGT CGGAACAGAC GCCCGCTCGG GACGCTGGCC GGGCCAACAC
AAGACCGAGT GCGGGCTACA CGCCAGCTAG
 
Protein sequence
MFKTERDLQR LQAVVFEHAE ELEGVSADSV VRWARDTFGT KLCATSSMSD AAITHLASSC 
APGLDVLFLD TGYHFPETLA FRDQVAAAFD VRVVDLRSKP APGNQIPPWS TDSNDCCRLR
KVVPLRQALA GYDAWLTGIR RAESPSRSQT PVVSWDSHNQ VVKVAPLAAW TDEALAAYLH
EHALPGNRLT ELGYPSIGCE PCTSLPVGTD ARSGRWPGQH KTECGLHAS