Gene Noca_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4816 
Symbol 
ID4595420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp141795 
End bp142580 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID639772603 
Productphosphosulfolactate synthase 
Protein accessionYP_919263 
Protein GI119714121 
COG category[S] Function unknown 
COG ID[COG1809] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.896374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGA AGCCTGACTT TCTCGACTTG CCCACGAGGG ACACAAAGCC ACGGATCAGC 
GGGCTTACCC ACGTGCTCGA CAAGGGCATG CCGCTGCGGT CTCTGGACGC CCTGCTGGAG
CAGGCAGCCG ACCTCATCGA CGTCTTGAAG GTCGGTTGGG GCATCGCCTA CATCGACCCG
CAGATCGCAG AGCGTGCGCA TCTTTGTCGA CAGGCCGGCG TGACCCTCTG TCTTGGAGGG
ACTCTGCTGG AAGTGTCGGC TGCCAACGGG CGGATTCCCG AGCTGGCTCG TTGGGCGCAC
CGGGTCGGGA TCGGGGCAGT CGAGGTCTCC AATGGCCTCG AGAGGATGTC TTGTGATGAG
AAGCGAATCC TGGTCCGTGA CCTCTCTGGC GAGTTTGTTG TTCTCGCTGA GACCGGCGCG
AAGGACGGCC ATACGCCCGT CACTGCTCAC CTTTGGGTCG ACGAAATGGA GGCCGATCTA
GCCGCAGGCG CAACTCTCGT CATTGCCGAA GGACGCGAGA GTGGAACCGT TGGGCTGTAT
CACCCTGACG GAACACCCCG GGTGGACCTG GCCGAGGCAA TTGCGGAGCG CATTTCCCTC
GACAGGGTGA TCTTTGAGGC GCCTGCCAAA TCTCACCAGA CTTGGTTCGT CAGCCGGTTC
GGGCCCCATG TTGGCCTTGG CAATATCGGA TCTGACGAGG TCATCGCATT GGAGACCCTC
CGACTGGGGC TGCGGGCCGA CACTGCCTTG CTCGCCGGAC CGGCGCGGAT TGGTGTGCCC
TCGTGA
 
Protein sequence
MHEKPDFLDL PTRDTKPRIS GLTHVLDKGM PLRSLDALLE QAADLIDVLK VGWGIAYIDP 
QIAERAHLCR QAGVTLCLGG TLLEVSAANG RIPELARWAH RVGIGAVEVS NGLERMSCDE
KRILVRDLSG EFVVLAETGA KDGHTPVTAH LWVDEMEADL AAGATLVIAE GRESGTVGLY
HPDGTPRVDL AEAIAERISL DRVIFEAPAK SHQTWFVSRF GPHVGLGNIG SDEVIALETL
RLGLRADTAL LAGPARIGVP S