Gene Noca_4815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4815 
Symbol 
ID4595412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp140263 
End bp141588 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content63% 
IMG OID639772602 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_919262 
Protein GI119714120 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.283023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGG CATCTGCGGC CAGACGAGTG GACCGCGAAC TTGAGGTGGT GGTCCTCGAG 
TCGGGTGCGC ACGCAGCGTA CGGGTTGTGC GGCCTGCCGT ACTTCCTCTC AGACGTCGTT
ACGGAAGTCG ATTCGCTGCG CGCATACCCG CCAACGTTCT TCCAGGAACA GCGAGACATC
AATCTGCGCT TTGGTGCGGA AGTGGTCCGT ATCGATCCCG AACGACAGCT AGTGAACTTT
CGCTCCGAAG GGCAGAGCGA ACATCTCCAC TACGACAAAC TCATCCTCAC CGCGGGTGCA
ACACCTTCGC TGCCACCGAT CCCGGGGCTG GACGACGACC ACGTGTTCAC AATCCGCAAT
GTGGCTGAGT CGGTTCGTTT GCGTTGCCTT CTGGACGCCG GTCACATCGG CCACGCGACC
GTCGTGGGGG GTGGATACAT AGGCCTGGAG GTCGTTGAGT CCTTCGCGGA GCGCGGCGTA
TCGGTGACCC TAATTGAGGC GCTTCCGGGC CTCATGGCCA ACCTTGACCC GGAGTTCTCC
CGGCGTGTGG AGGAAGAGGT CCGTCTCCAC GCCGAGGTCA GACTGTCGTC AGGGCTGGTA
TCACTGGTCC GCACTGACGA GGGGCTTACT CTCAGCCTTG CTGACGGTGA CACCATCGAG
ACGGACGTCG TCGTTGTGGC CACCGGAGTA CGCCCCGCGA GCGGCCTCGG ATCAAGCATC
GGTGCGAATA CCGGTCCACA CGGCGCACTC CTGGTTGACG AGCAAATGCG GACGTCGGTG
CCCAACGTCT TCGCTGCTGG AGACTGCATA GCTCCCAACC ACATCGTCAC TGGCCGTCCG
ACCTTCATTC CGCTTGGTCC GGCAGCGAAC AAGACCGGAC GCGTTGCCGG AACGGTGGCT
GCCGGAGGAA CTGCGTGCTT CTCGGGTGTC GCAGGGACCG CCATCGTGAA GGTGTTCGGG
CTAGGAATTG GACGGACTGG GTTGACCCTG GCTGAGGCAT TGTCGGCTGG GTACGACGCA
CAGGCGACTG ATGCGGTTGG CAGGTCGAGA GCTAAATACT TCCCAGGCTC TGCCCCCATC
GACGTCCGAC TGGTTCACAA CAGCGACGGA CGATTGCTCG GCGCCCAGTT CGTTGGGGTC
GGTGACGAGG TCGCCAAGCG GGTCGACGTC GCTGCCGTCG CGCTGCACGC CGGGCTCAGC
GTCGAAGATC TCGCAGATCT GGATCTTTCC TACGCACCTC CTTTCGCGCC TGTCTACGAG
CCGATCCTGC TCGCCGCCAA CTCCGCGGTC GCGTCGCTTA AACCCATGGA AGACCTGGCG
CATTGA
 
Protein sequence
MSAASAARRV DRELEVVVLE SGAHAAYGLC GLPYFLSDVV TEVDSLRAYP PTFFQEQRDI 
NLRFGAEVVR IDPERQLVNF RSEGQSEHLH YDKLILTAGA TPSLPPIPGL DDDHVFTIRN
VAESVRLRCL LDAGHIGHAT VVGGGYIGLE VVESFAERGV SVTLIEALPG LMANLDPEFS
RRVEEEVRLH AEVRLSSGLV SLVRTDEGLT LSLADGDTIE TDVVVVATGV RPASGLGSSI
GANTGPHGAL LVDEQMRTSV PNVFAAGDCI APNHIVTGRP TFIPLGPAAN KTGRVAGTVA
AGGTACFSGV AGTAIVKVFG LGIGRTGLTL AEALSAGYDA QATDAVGRSR AKYFPGSAPI
DVRLVHNSDG RLLGAQFVGV GDEVAKRVDV AAVALHAGLS VEDLADLDLS YAPPFAPVYE
PILLAANSAV ASLKPMEDLA H