| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4780 |
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| Symbol | |
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| ID | 4595380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 91933 |
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| End bp | 95640 |
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| Gene Length | 3708 bp |
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| Protein Length | 1235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772567 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_919227 |
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| Protein GI | 119714085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.236113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0133123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAAG CAACCAGTGA GACGGTCGGG CCGCAGGCGA CGTACGAGTT GAACTTCGAC
TTGGACGGAT CGTCGTTTGC GGTGCGCGAG AACGTCGTCG ACATCTTGGA GCGCGAGCTG
CTCGGCCCGA TCAACGGGCC GGAGGAGTTG CTTCCGTTCA GCCCGAGGTC GCAGTACCTC
GTCGGCCACA TCGCCCCGGT GAAGCTGACG GGTGCGAAGT CGTCGGCTCT CGGTGACGAC
GACACAGCGC AGGATCTCGT CGAGGTGCGC ACGGACGACG ACGGTCTTTC TGAGGGCCGT
GGGGTTCCGG CGTACGCCGC TGATGACACC GAGGCGGACT CTGATGATGA CGACGCAGAG
GACCGGGCAC CCAAGCAGGG CCTGATGATT CCGGCGTCGA TGGGGCTTCG GTTCCAGGTG
CCCATGGACC TGGACTCGTT CGATGTGGCG GCGTCGTGGG GCATCTACGA GTCCGTTGAG
ACCGACAAGG TGTCGAAGGC CGGTCGACCG ATCCGCCACT TCCAGCGGAA TCCGGTCGAA
GAGCGTCGCA CGATCCGTCT CGCCAACCTG GTGCCCGGGC AGACTGCCTC GATTGCGCTG
CGTGACGATG CATGTCTTCG GGTCGACCGG TACGACGACC CGACGTTTGG GCGGGTGCTG
GTGGAGATCG CGTTGTGCAA CGACCGCGAG ACGCCGATGC CGATCCCATT GAGCATGTGG
ATGTTCCAGA CCAAGCTCCT GGTCGACGCC GGCGGCGCCG AGGTCTTCCT GCCGGTGCGT
GACGTGTTGG AGCAGGACTG GCCCGAGCAC GACGAGGAGG TTAAGCGCCT CAACCTCCAG
TACCGCAACC GTCTGGAGTT CGCGATCGGC CGGACGTGCT CGGTGGACTG GACGGTCAAG
GAAGGCTCGC GTCGCGCCAC GTCGGTTGAG ACGAAGTGGT TGCCGATCGG GGAGACCCCG
CAGACGCGTG CCCGGTCGGT CAAGGACGCG TTGCTGTCGA TGGACGCGCT CTCCAAGGTC
AGCCCCGACG GGCTGCGCGC GGGGTTGGAG CCGCTCGTGA CCGGCTACGG CACGTGGCTC
GATGAGCAGG AGGCCGAAGC GGCGAGGCTC CCTACCCACT GGCGGGAGAC CTCCGAGCTG
GTCTTGTGGG AGGCCCGGCA GGCATATGGC CGGCTTGTTG CCGGTCTGGA GCATGTCGCG
ACCGACCCGG AAGCGCTGCG GTGCTTCCAG TTCATGAACC GCGTGATGCG CGACCAGCGC
GTCGCGTCAC AGGTAGCTGC TGAGCGAGCA TCCGATGCGT CGGTGACCAT CGACCAGGCG
CAGGCCAAGG TCGCCGAGCG AGGCCACGGC GCGGCTTCGT GGCGCCCGTT CCAGTTGGCG
TTCATCCTCA TGCAACTCGG TGCACTGACC GATCCGACCG CGCCGCTCCG GAGCGCTGAG
CACCAGTCCC GCGTTGAGTT GCTGTTCTTC CCGACCGGTG GCGGCAAGAC CGAGGCGTAC
CTGGGTCTAG CGGCGTACAC GTTTGCGATC CGGCGTCGAC AGGGCGTCGT GGAGTCGGTC
GACGGTCCGC TCGATGGGAG CGACGGCATC GCGGTGTTGA TGCGCTACAC CCTGCGCCTG
CTGACAGCCC AACAGTTCCA GCGTGCCACC ACGTTGATGT GCGCTGCCGA GCTTGCCCGC
CGCGAGGATG AAGCGATGTG GGGCATCGAG CCCTTCCGCA TTGGCCTGTG GGTTGGAACC
GATGTGAGCC CGAAGCGGTT CGAGGAAGCG GACGAGCAAC TGAAGAAGGC GAACGAATAC
GGCTCGCACC GGCTGACTGT GCTCCAGATC CAGCGTTGCC CTTGGTGCGG TACGCCGATC
ACCGCTGCAC ACGTGAAGGC CGATGCCACG ATGCGTCGCG TGTTCGTCCA CTGCGGCGAC
GAGCTGGCCC GCTGCCCGTT CTCCAAGGGC GGAGCGGTCT CCGAGGGACT TCCGGTTCTG
ACGGTCGACG AGGAGATCTA CCGGCTCACG CCGGCGTTCG TGATCGCCAC GGTAGACAAG
TTCGCACGTC TCGCTCGCGA GGGCGAGGCG GCCGCACTGT TCGGCTACGT AAGCAAGCGG
TGTGGTCGCC ACGGATACGT TCATGCCGAC TATGCCCCCT GCCAGGTCGG TTCCCACCCA
GCGAATGGCG GGCAGCCTGC GGCAACGGTG CGCCCGGTGG GTCGTCTCCG CCCGCCGGAT
CTGATCATCC AGGACGAGTT GCACCTCATC ACGGGCGCTC TGGGCACGGC CGTCGGGCTC
TTCGAGGTCG CGGTCGAGAC GCTGTCGTCG TGGGAGACCC CGGACGGGAA GCCGGTCAAG
CCGCTGATCG TCGCCTCGAC CGCAACCGTG CGCAACGCCC AGGAGCAAGT GCGAGGACTG
TACGGACGCC AAGTCGAAAT CTTTCCCCCG CAGGTGCTCG ACGTTGCTGA CACCTTCTTC
TCCCAAGAGG TGCCGATCGA CAGGCACAAC CCGGGTCGGC GATACATCGG AGTCAGTGCT
CAGGGAGTGC GTCTGTCGAG TGCCGAAATC CGTGTGTCCG AGGTGCTGTT GTCATCCGGA
CAGTTGCTGT TCGATCGTGC CGGTGCTGCA GCCGACCCCT ACATGACGCT GGTCGGGTAC
TTCAATGCCA CCCGTGAGCT GGCGGGCATG GCGCGATACA TGGCCGACGA TGTTGCGAAC
CGAGTGGGTA ACCCGGCCAA GGATTCCGGG TTCCCTCGGC GGTACGGCGC TGCCTTCGGC
AACCTCCACA CGGCCGAACT GACGTCGCGG ATCGCGTCGG CGGAGATCGG TCGGACCTTG
GACCGGCTCG GCTTGGAGTT CGACCCAGCC TTCGACTCGA CCGAGGCTTT CCAAGCGCGC
CTCGCCGCGC GCAAGGCAGA CCAGAAGGTC ACCTACCGCA CCGAGTCGCC TTTCGACGTG
GTGCTTGCGA CCTCGATGCT CCAAGTGGGT GTCGACGTCC AGCGGCTCGG TCTTATGCTC
GTGGTCGGGC AGCCGAAGAA TACGGCCGAA TACATCCAGG CGTCCTCGCG TGTGGGCCGC
GACGCGTCCG ACCGTCCCGG CCTGGTGGTG GCGCTAGGCA ACTGGGCTCG CCCTCGCGAT
CTCGCGCATT TCGAGCAATT CCGGCACTAC CACGAGACGT TCTACGCCCA GGTTGAAGCG
CTGTCGGTGA CGCCGTACTC GCCAACGTCC CTTGCCCGCG GCATCGACGG TCTGCTGGTG
AGCGTCGCTC GCGTGACCGA GGCAGCCACC GCAGATGGGT TGTCACCCGA GCGCGACGCG
TGGCGGATCA AGGACCAACG CTCGATAGTG GACGCACTGT CAGAGCGACT CAAAACGAGG
ATCGGCGCAG CCGCGCAGAG CGACGATGCA ACCAAGCGGG CCAACGACTT GCTCGTGAAC
CGAATCGATC GGTGGACCGA GCGCGCCAAG CGTGCCGCGG AAATGAGCAA GACCCTGGTC
TATGAACGCA CAGGCGAAGG CGACAAGTAC CTGCCGCTCA TCATCAGCCC CGAGAACGCG
AAGGCATCCG TGGGCGGGTC GATGGAGGCG CCGTTCATCA TTGCGAACTC AATGCGCGAG
GTGCAGCCAG AGATCAACCT GCTCGTCAGC CCTATGCCCG AGCGACTGTT CGCGCGCACA
CCCGCGGGTG TGCCTGCGTG GACGCTGCCG ACGGGAGAGG ACGACTGA
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| Protein sequence | MTEATSETVG PQATYELNFD LDGSSFAVRE NVVDILEREL LGPINGPEEL LPFSPRSQYL
VGHIAPVKLT GAKSSALGDD DTAQDLVEVR TDDDGLSEGR GVPAYAADDT EADSDDDDAE
DRAPKQGLMI PASMGLRFQV PMDLDSFDVA ASWGIYESVE TDKVSKAGRP IRHFQRNPVE
ERRTIRLANL VPGQTASIAL RDDACLRVDR YDDPTFGRVL VEIALCNDRE TPMPIPLSMW
MFQTKLLVDA GGAEVFLPVR DVLEQDWPEH DEEVKRLNLQ YRNRLEFAIG RTCSVDWTVK
EGSRRATSVE TKWLPIGETP QTRARSVKDA LLSMDALSKV SPDGLRAGLE PLVTGYGTWL
DEQEAEAARL PTHWRETSEL VLWEARQAYG RLVAGLEHVA TDPEALRCFQ FMNRVMRDQR
VASQVAAERA SDASVTIDQA QAKVAERGHG AASWRPFQLA FILMQLGALT DPTAPLRSAE
HQSRVELLFF PTGGGKTEAY LGLAAYTFAI RRRQGVVESV DGPLDGSDGI AVLMRYTLRL
LTAQQFQRAT TLMCAAELAR REDEAMWGIE PFRIGLWVGT DVSPKRFEEA DEQLKKANEY
GSHRLTVLQI QRCPWCGTPI TAAHVKADAT MRRVFVHCGD ELARCPFSKG GAVSEGLPVL
TVDEEIYRLT PAFVIATVDK FARLAREGEA AALFGYVSKR CGRHGYVHAD YAPCQVGSHP
ANGGQPAATV RPVGRLRPPD LIIQDELHLI TGALGTAVGL FEVAVETLSS WETPDGKPVK
PLIVASTATV RNAQEQVRGL YGRQVEIFPP QVLDVADTFF SQEVPIDRHN PGRRYIGVSA
QGVRLSSAEI RVSEVLLSSG QLLFDRAGAA ADPYMTLVGY FNATRELAGM ARYMADDVAN
RVGNPAKDSG FPRRYGAAFG NLHTAELTSR IASAEIGRTL DRLGLEFDPA FDSTEAFQAR
LAARKADQKV TYRTESPFDV VLATSMLQVG VDVQRLGLML VVGQPKNTAE YIQASSRVGR
DASDRPGLVV ALGNWARPRD LAHFEQFRHY HETFYAQVEA LSVTPYSPTS LARGIDGLLV
SVARVTEAAT ADGLSPERDA WRIKDQRSIV DALSERLKTR IGAAAQSDDA TKRANDLLVN
RIDRWTERAK RAAEMSKTLV YERTGEGDKY LPLIISPENA KASVGGSMEA PFIIANSMRE
VQPEINLLVS PMPERLFART PAGVPAWTLP TGEDD
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