Gene Noca_4748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4748 
Symbol 
ID4595463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp51448 
End bp52737 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content69% 
IMG OID639772537 
Producthypothetical protein 
Protein accessionYP_919197 
Protein GI119714055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA CACACAGCGC CCCGCCAAGC GGCCGGGCAG ACCACGCCAG CGACCACGAC 
CGTGACCGGC AGACCTTCGA GCTCTACGGC CGCCGGATCA CCCACATCAA CAACCGCGAC
GTCCAGCAGC TCCTTGCGGC CGCGCACACC GACCGGGTCC GGCCTCTGTG CCGGTGCCGC
CCCGACGGCG TCGCCATGTA CGTCGCCAAG ATCGGGCCTG ACAAGTACGT CATCAAACGC
ATGCCCGACT CCGGCCTCGA GCACGCGCAC CGCTGCGCCT CCTACCTGCC GCCCGAAGAG
CTCTCCGGCC TCGGGCAGGT CCTCGGCAGC GCGATCACCG AGGAAGCCGA CAGCGGCCTG
ACCGCCATCA AGCTCGGGTT CCGCATGTCT AAGGCCGAGC GCGGCGCCCC GACCGGCGCC
GGGGGCGGGG GAGTGGCCGA CTCCGTCGCA GCCGACCCCA ACCGACTAAC CCTCCGCGCT
GTCCTGCACT ACCTGTGGCA AGAAGCCGAC CTGGCGACCT GGACGCCCGG TATGGACGGC
AAGCGCAACT GGCGCATCGT GTCCTGGTAC CTGCGCCAGG CAGCCCGCGG GAAGTTCACC
AAGGGCAAGC CGCTCGCCAC GAGGCTGTTC GTCCCCGAGC CGTTCAACGT CGAGAAGAAG
ACCGAGCTCG CCGCGCGGCG GCTCTCCGCG TGGGCGCCGA TGCAGCAGCA CGGCTCCGGC
CAGCAGTTCA TGATGCTCAT CGGCGAACTC AAGGAGATCG CGTCGGCTCG GTTCGGGCAC
AAGCTGGTCA TCAAGCACCT GCCCGACGCG CCGCTTATGG TCGACGACAC GCTCCTGGCC
CGCCTCAACA AGCGGTTCGG TGACGAGCTC GAGCTGTGGC AGAGCGACGA CGACGGCCAC
CTGATGGTGA TCGCGACCTT CTCCGTGGGC CGCGCCGGAC TGGCCACCGC CGAGGAGATC
TCCCTCGTCA TGACCGACAG CCACTGGCTG CCGTACGAAT CGCTCCTCGA CAAGCTGCTC
CTCGACGCCG CGCTCGACTC CCGCCGCAGG TTCACCAAGT CGCTGCGCTA CAACCTCGCT
CCCGACACGC CCATGGCCTC CCTTGTGTTC ACCGACACCG AGACCCCGAC CGCGGCGTTC
CTGCTCCTCA GCGACGAGGA CCGCGACACC GCCGCCCAGA TCGCCAGCGA CACTGGCACC
GAGGTCTGGA CGTGGATCGT CACCGAGGAC ATGCCGCCGC TCCCGCCCGT CGCTGACCAT
CGGCACACCA CGGCCCACAG CGACCACTGA
 
Protein sequence
MTTTHSAPPS GRADHASDHD RDRQTFELYG RRITHINNRD VQQLLAAAHT DRVRPLCRCR 
PDGVAMYVAK IGPDKYVIKR MPDSGLEHAH RCASYLPPEE LSGLGQVLGS AITEEADSGL
TAIKLGFRMS KAERGAPTGA GGGGVADSVA ADPNRLTLRA VLHYLWQEAD LATWTPGMDG
KRNWRIVSWY LRQAARGKFT KGKPLATRLF VPEPFNVEKK TELAARRLSA WAPMQQHGSG
QQFMMLIGEL KEIASARFGH KLVIKHLPDA PLMVDDTLLA RLNKRFGDEL ELWQSDDDGH
LMVIATFSVG RAGLATAEEI SLVMTDSHWL PYESLLDKLL LDAALDSRRR FTKSLRYNLA
PDTPMASLVF TDTETPTAAF LLLSDEDRDT AAQIASDTGT EVWTWIVTED MPPLPPVADH
RHTTAHSDH