Gene Noca_4747 details

Gene Information

• Locus tag: Noca_4747
• ID: 4595462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008697
• Strand: -
• Start bp: 45479
• End bp: 51256
• Gene Length: 5778 bp
• Protein Length: 1925 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639772536
• Product: helicase domain-containing protein
• Protein accession: YP_919196
• Protein GI: 119714054
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG4646] DNA methylase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.099466
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCGCGAG GGCGTGCGAG TGTTGCTGAC TCTGATCAGC TGGCGCTGTG GGATCTTGGT 
GAGGAGCCTG GTAACCCGGC CGGTGAGGTC ACCAGCGAGG ACGAGGGCCA CGCGGGCAGC 
TCACTGCAGG TCGTGACGGA GGAAGGGGCT CGGGATGAAC CCGTACGGGA CGCGGATGCG 
GGAGCACTAC GCGAAGCATC GGGCCACGGA GTTGGCGGCG ATCGCCGATC CGGAGAGCTT 
CTTCGAGGAA CTGGGGCTGC AGATCGAGAC AGAGATCGAC ACGTTGGCGG ACCAGATCGC 
CGGCCCATCG GACCCGTCGG AGGGCTACCT GGAGCGGGTG GGAAGGCTGA CCGAGGCCAG 
GACGTCGGCG GAGTCGGAGG TCCTGCGGCA GCACATGAAG CCGGGCCTGA CGACTCCCCC 
GAACACGTAA CAACCGCGAC AGACCCCGTC GTCGACATAC AGCCGACGAC TGCGACCGCT 
CCGACGGGAG CGCCGGCGGT GGAACCTGCC GGGCTGGTTC CTTCCGGGGA GTCGCTCCGG 
TTCCGGCCGG GCACGCAGCG GGACCTTGCA CCGTCGACGC CGCGGGAGCG GCTGACCGCC 
AACGTGGCCG TGTTGGAACT GCTGGCCCAG CTCGACGAGA AGAACCGGCT CCTCTCCGCC 
CATGAGCAGG GCGTGTTGGC ACGCTGGTCG GGCTGGGGGT CGCTGCCGGA GGTCTTCGAC 
GACACCGCCA ACCACAACGA GGCCGCAACG CGGGCTCGCG AGCTGCTGCA GGGCCGAGCC 
CGTGCGGCTG CGGCGCGTAC GACGCTGAGC GCGCACTACA CCGACGCGGC CCTGGTCAAG 
GCGGTGTGGT CGGCGCTCGG TACGGCTGGG TTCGACCAGT CCGCGGGCGG CCGGGTCCTG 
GAGCCCGGCT GCGGCTCGGG CACCTTCATC GGGTTCGCGC CCGACCATGT CCGCGACGTG 
GTCGGGGTCG AGCTGGACCC GACGACCGCG CGGGTGGCAT CGCTGCTCTA CCCGGCCGCG 
GACATCCGCG GCGAGTCGTT CGCTGAGACC CGGCTGCCCG AGGGGAAGCG GGACTTGGTG 
ATCGGCAACG TCCCCTTCGC CGACGTCGTC CCGCATGACT CGACCTACAA CCGGCTCGGG 
CTGAGCCTGC ACAACTACTT CATCTACAAG AGCCTGCACC TGGTGCGTCC CGGTGGCGTG 
GTGGCGGTGC TGACGTCGCG GTGGACGATG GACGCGGCCA ACCCGGCCGC GCGCGAGGCG 
TTCGCCGACA TGGCGGACCT GGTCACGGCG CTACGGCTGC CGAACCAGAC CCACCACCAG 
GCCGCTGGCA CCGACGTCAT CACCGACCTG CTGGTCTTCC GCCGACGTGT CGAGGGCGAG 
AAGCCACTGG ACCTCACGCC CGGGTGGCGG AACCTGGAGC GGTTGCCGTC GTTCCGTGCC 
GGGACCGGGC TCGAAGACGC CGAGGTCAAC CTCAACTCGC TGTTCGTGCA GCAGCCGGCC 
CGGGTGCTCG GCTGGCTCAC CTCACGCTCG GGCCGGTTCG GTCCCGAGGT CGCGGTCAGC 
CCGCCGTTGG CGAGCGATGG CCATAGCCTC GCTGAGCGGG TCGCTGTGGA TCTGGAGCGG 
CAGCTCGCCT TCGACCTGTC CAACTACGCC GACGTACGGC AACTGTTCAC TCCTCCCCCG 
GCCACGACAC GGCCGACGTC CACCCCGACG TCCAGACCGA GGCCGCCGCG TACGCCGGTC 
CCACGACCCC GACGTGGTGC TGTCGAGGAG GAGCCTCTGG TGCTGCCCGG GTCGGTGGTC 
CGGGCCGAGG GTCACATCAG CCTTGGTGAG GATGGCGGCT GGCTGCACGT ACGTCACGGC 
GTCCCCGAGC CGCTGGAGGT GCCGAAGTCC CAGGAGAACG AGCTGCGGAT GCTGCTGGGA 
CTGCGCGACA CGGTCGTCAC GCTGTTGGAG GCCGAGGCGA CCACGCCCCT ACCAGGTGAC 
CTGCCGACGG CCGCCACCCT GCCCAAGGGA CCGGGAGCCG CGGCTGAGGA GCAGATGACG 
GCGCTGCGGG AGCGGCTGAA CCGGCAGTAC GACGCCTACG TCAAGCGGTA CGGGCCGATC 
AACCGGGTCA CCAGCCGCAA CACCGGCCGG CTCGACCGGA CGACCGGTGA GCCGGTGCTC 
GCGCAGGTTC GGCCCCGCCA GGGCGGGTTC CGCGGCGACC CCCACTCACC TGCTGTGTTC 
GCGCTCGAGC ACTACGACTC CGCGACCGGC ACAGCCCGCA AGGCCGACAT CTTCACCGAT 
CGGGTGGTCG CGCCGCGGGT GCTGCGCACC CGCGCGGACT CCCCGGCCGA TGCGGTGTCG 
CTGTGTCTGG ACACGTACGG CGAACTGCGC ACCAGCGAGG TCGCCCGGCT GCTCGGCGTC 
GACGAGAAGC AGGCCACGGC CGAGCTGGAG TCGTTCGCGT TCGTCGACCC CGACACCGTC 
AAGCGCTCCG AGGGCGGCTG GACGGCCGAC TGGGTGCCGC GTGCGGAGTT CCTGTCGGGG 
AACGTGCGGG CCCGGCTGAC GCGGGTCGGT GAGGTCCTCG AGCAGCTGGT CGAGGGCGCG 
GCCGCGACCG GCGACGCGTC GGAGCAGCCG ATGGTGCGCC GCCTCCAGGC TGCCGAGGCC 
GCGCTTGGCG AGGTGCTGCC CGAGGACCTG GGGCCGACCG AGATCGTCGC CCAGCTCGGC 
GTGCCGTGGG TGCCGGCGGA GACCGTGGAG CAGTTCCTGC GCGAGACTCT CGATGACCGC 
ACCGTGGAGG TTGAACATCC GGGCGGATCG GTGTGGTCGG TGCGTGGCAA CCGGCACTCG 
GTGGCCGCCC GGAACACGTG GGGCACCGAA CGGGCGTGCG CGATCGACGT CGTCCAGGCG 
TGTCTGGAGC AGCGGCAGAT CCGGGTCACC GACGAGACCC CCGACGGTCG GCGGATTCCG 
AACGAGACCG CCACGTTCGC CGCGCAGGAG AAGGCCGAGG AGCTGCAGGA GCGGTTCGCG 
ACCTGGCTGT GGGAGGACCC CGAGCGGTGT CAGCAGTTGG TGCGCCGTTA CAACGACGCC 
CTGAACGCGA TCGTGCTGCG CTCCTACGAA GTCGACGAGG ACAAGCACTA CCCGGGCATG 
GCCCGTATCC AGGACGGCCG GCAGCTGCGG CTGCGGCCCC ATCAGCACGC CGCAGTGGCA 
CGGATGGTGG CCCAGCCGTC GGTGCTGCTG GCCCACGAGG TTGGAGCTGG GAAGACCCTG 
GCCGCGGTGA CAGGCGTGTC GGAGCTGCGT CGCTTGGGGT TGGTTCGCAA ACCAGCGGTG 
GTCGTGCCCA ACCACATGCT CGAGCAGTTC TCCCGGGAGT GGCTGCAGGC CTACCCCCAG 
GCCCGGATTC TGACGTGCGG CACCGAGGAC CTGGTCAAGG ACAAGCGGCA GCTGTTCGTC 
GCCCGCGCCG CGACCGGCGA CTGGGACGCG GTCATCATGT CCCGCTCGGC GTTCGAGAAG 
ATCCCGGTCT CCAAGGACAC CGAGGAGGCC TACCTCGACG AGCAGCTGAC ACAGCTGCGG 
ATGTGGCTGG CCGCCTCCAA GGACGGCCGC GGACTGTCGG TCAAGCGGCT CGAGGGCACA 
CTCGCGCGGG CCGAGGAGCG GCTGAAGGCG CTGCGCGACG TCGAACGCGA CCCGGCGATC 
ACCTTCGAGG CCACCGGGAT CGACTATCTG TGCGTGGATG AGGCGCACGG CTACAAGAAC 
CTCCGGCTGG CCTCCAACAT CCCCGGCGTA GCCGTGGACG GGTCGAACCG GGCCACCGAC 
CTGGACTTGA AGATGTCCTA CCTGCGCGGG CGCCACGGCC GCAGGGTGGC GACGTTCATG 
ACCGCCACGC CGATCGCCAA CTCCGTGGCC GAGGCGTACA CGATGCTGCG CTACCTCGCC 
CCGGCCGATC TGGACGCGGC GGGGATCAGC GACTTCGACA CCTGGGCGGC CACCTTCGGG 
CAGGTCGTCA CCGACCTTGA GCTCTCCCCG TCCGGGACGG GGTTCCGGAT GAAGGCCCGG 
TTCGCGAAGT TCAACAACGT CCCCGAGTTG CTGCGGCTGT GGCACCAGGT CGCCGATGTG 
AAGACCGCAG AGGACCTCCA CCTGCCCACC CCCGACCTAG AGGGCGGCCA GCCGGAGACG 
GTGGTGGTCC CGCCGAGCCA GGAACTGGTC GACTTCATGG CGCTGCTGGC CAAGCGGGCC 
GACGCGGTCT CCTCGCGGTC GGTCGATCCG AGCGAGGACA ACATGCTCAA GATCAGTGGC 
CACGGCCGCG CGGCCGCGCT TGACCTGCGG CTCGTCGACC ACCAGCTCGA CGGCCTGGGG 
GCGTTCTTGG ACCGGGAACC CTCCAAGGTC GACGCGGTCG CCGAACGTGT CGCCGGCATC 
TACCACGACC ACGCCGACGT CGCCTTCGGC CAAGACCCGG AGCCGGGCGC CCTGCAGCTG 
GTGTTCTGCG ACCTGGGCAC GCCGACCGGT GCGGGCTGGA ACGCCTACGA GGAGCTCAAG 
GCCCAGCTCG TCTCCCGGGG CGTCCCGGCC GGGAAGGTGC GGTTCATGCA CGAGGCCAAC 
AACGACCGCG CGAAGGCGCG GCTGTTCGAG CAGGCCCGCA CCGGCCACGT GTCGGTGCTC 
ATCGGGTCGA CGGAGAAGAT GGGCGTGGGC ACGAACGTGC AGCGCCGCGC AGTCGCCCTG 
CATCACGTGG ACTGTCCGTG GCGGCCGGCC GACCTGGCGC AGCGTGACGG CCGCATCATG 
CGGCAGGGCA ACCTGAACGA GTCCGTCCAG GTGTACCGCT ATGTCACCGA GTCATCCTTC 
GACACCTATC TGTGGCAGAC GGTGGAGCGG AAGGCGAAGT TCATCAACCA GTTGATGCGC 
GGCCGCCTGG ACGTGCGCGA GATCGAGGAC ATCGGCGACT CGGCGCTCTC CTACGCCGAG 
GTGAAGGCCC TGGCCTCAGG TGACCCGCGG ATCATGGAAC TGGCCAAGGC CGAGACCGAT 
GCGACCAAGC TGGAGCGCCT GGAGCGGGCC TGGGCGGCAG CCCAGCGCAG TCTCGCGGCG 
ACGATCCGGG AGGCCGGGCC CCGGTTGGAG CGGCTGGCGA CCGACCGTGA GCAGCTCTTG 
GCGGCGATGC CGATGCGGCG CGACACCGAC GGCGACGCGT TCTCGATGAG GATCAACGGT 
GCGGCGTACG GCAAGCGAGC CGACGCCGCC CCCGCGCTGC AGCGGGCCCT GCAAACGGTG 
CAGCCGTACC AGCGCGACCC CCTGCCGCTC GGTGACGTGG GCGGGCTGCA CCTGCAGGCG 
TCCGCGGACT CGTGGCTGGG CCAGCCCCGG TACGTCGTCT CGCTCGTCGA GGTGCCGCGG 
GTGCACCTGC TCGTCGAGGC CAGCGACGTG CGTCAACCGA ACATCGGCCT AGTGACACGG 
GTCGAGAACC TCCCCCGTCG CCTGGAGCGG GTGCTCGACG ACGTCGAGAC GGACACCACC 
AAGATCAACC GCGAAGCCGA GAGGGCCCAC GCTGGCCTCG CCGATGTCTT CCCGCGCGCC 
GGCGAGCTCG CCGAGGTGCG CGCGAAGCGG GACCGGCTCT CGGCCGAACT GGCCGCCGAC 
AGCGCCGAGC AGGCATCAGG CGAGCAAGCC GCTGAGCAGC ACTCCGCGCC TAACGGATCC 
CAGCCCAACA CTCCCACGAC GGTGCCCGAT CCGACTGACC AGGCGGGGCG GCCCGCGATC 
GCGCCGCCAC CCCCTCCCGC GAGGCCGCGG TCGGACGAGG GTCCACGACC GCCCGCCCCT 
GCGGGGTGGT CGCGATGA 

 

Protein sequence

MARGRASVAD SDQLALWDLG EEPGNPAGEV TSEDEGHAGS SLQVVTEEGA RDEPVRDADA 
GALREASGHG VGGDRRSGEL LRGTGAADRD RDRHVGGPDR RPIGPVGGLP GAGGKADRGQ 
DVGGVGGPAA AHEAGPDDSP EHVTTATDPV VDIQPTTATA PTGAPAVEPA GLVPSGESLR 
FRPGTQRDLA PSTPRERLTA NVAVLELLAQ LDEKNRLLSA HEQGVLARWS GWGSLPEVFD 
DTANHNEAAT RARELLQGRA RAAAARTTLS AHYTDAALVK AVWSALGTAG FDQSAGGRVL 
EPGCGSGTFI GFAPDHVRDV VGVELDPTTA RVASLLYPAA DIRGESFAET RLPEGKRDLV 
IGNVPFADVV PHDSTYNRLG LSLHNYFIYK SLHLVRPGGV VAVLTSRWTM DAANPAAREA 
FADMADLVTA LRLPNQTHHQ AAGTDVITDL LVFRRRVEGE KPLDLTPGWR NLERLPSFRA 
GTGLEDAEVN LNSLFVQQPA RVLGWLTSRS GRFGPEVAVS PPLASDGHSL AERVAVDLER 
QLAFDLSNYA DVRQLFTPPP ATTRPTSTPT SRPRPPRTPV PRPRRGAVEE EPLVLPGSVV 
RAEGHISLGE DGGWLHVRHG VPEPLEVPKS QENELRMLLG LRDTVVTLLE AEATTPLPGD 
LPTAATLPKG PGAAAEEQMT ALRERLNRQY DAYVKRYGPI NRVTSRNTGR LDRTTGEPVL 
AQVRPRQGGF RGDPHSPAVF ALEHYDSATG TARKADIFTD RVVAPRVLRT RADSPADAVS 
LCLDTYGELR TSEVARLLGV DEKQATAELE SFAFVDPDTV KRSEGGWTAD WVPRAEFLSG 
NVRARLTRVG EVLEQLVEGA AATGDASEQP MVRRLQAAEA ALGEVLPEDL GPTEIVAQLG 
VPWVPAETVE QFLRETLDDR TVEVEHPGGS VWSVRGNRHS VAARNTWGTE RACAIDVVQA 
CLEQRQIRVT DETPDGRRIP NETATFAAQE KAEELQERFA TWLWEDPERC QQLVRRYNDA 
LNAIVLRSYE VDEDKHYPGM ARIQDGRQLR LRPHQHAAVA RMVAQPSVLL AHEVGAGKTL 
AAVTGVSELR RLGLVRKPAV VVPNHMLEQF SREWLQAYPQ ARILTCGTED LVKDKRQLFV 
ARAATGDWDA VIMSRSAFEK IPVSKDTEEA YLDEQLTQLR MWLAASKDGR GLSVKRLEGT 
LARAEERLKA LRDVERDPAI TFEATGIDYL CVDEAHGYKN LRLASNIPGV AVDGSNRATD 
LDLKMSYLRG RHGRRVATFM TATPIANSVA EAYTMLRYLA PADLDAAGIS DFDTWAATFG 
QVVTDLELSP SGTGFRMKAR FAKFNNVPEL LRLWHQVADV KTAEDLHLPT PDLEGGQPET 
VVVPPSQELV DFMALLAKRA DAVSSRSVDP SEDNMLKISG HGRAAALDLR LVDHQLDGLG 
AFLDREPSKV DAVAERVAGI YHDHADVAFG QDPEPGALQL VFCDLGTPTG AGWNAYEELK 
AQLVSRGVPA GKVRFMHEAN NDRAKARLFE QARTGHVSVL IGSTEKMGVG TNVQRRAVAL 
HHVDCPWRPA DLAQRDGRIM RQGNLNESVQ VYRYVTESSF DTYLWQTVER KAKFINQLMR 
GRLDVREIED IGDSALSYAE VKALASGDPR IMELAKAETD ATKLERLERA WAAAQRSLAA 
TIREAGPRLE RLATDREQLL AAMPMRRDTD GDAFSMRING AAYGKRADAA PALQRALQTV 
QPYQRDPLPL GDVGGLHLQA SADSWLGQPR YVVSLVEVPR VHLLVEASDV RQPNIGLVTR 
VENLPRRLER VLDDVETDTT KINREAERAH AGLADVFPRA GELAEVRAKR DRLSAELAAD 
SAEQASGEQA AEQHSAPNGS QPNTPTTVPD PTDQAGRPAI APPPPPARPR SDEGPRPPAP 
AGWSR