Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4725 |
Symbol | |
ID | 4595360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 24370 |
End bp | 25497 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772514 |
Product | phage integrase family protein |
Protein accession | YP_919174 |
Protein GI | 119714032 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.675287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCTTA CGGTGGTCCG GTCGCTGGAC TCCGCGCGCA GCCTGCGTGG CAGCGTCGAC GTCGAGGAGT TCGAGCAGGA GCTGATCGAC CAGTACTCGC TCGCGCTCGG CGCGGTGGGG ATCAACGACA AGACCGCTGC GGCGGATCGT TCGGTGGTCT TCGAGTTCGC GCACTTCCTG GGTCGGCCGT TGTGGACCGC GCAGGTCGAG GACGCCGACC GGTACCTGCG GACGGCACGG CGAGAGCGCG GTCTGGCGAG GTCGACGGTG GCGGGCAAGG CCGCGTCGTT GGCGAAGTTC TACGAGTTCG TCATCGTGCG TTACCAAGGC GACATCCACG CCCTGTTCGA CCAGGTCATG GTCCAGCCGA TCGATGAGTT CAACCGGCCG CGAGCGATTG CGGCCGCCAC CTCGGGCAGG ATCCCGCCAC GGGCCGACGA GGTGCGTGAC CTCTTCGAAG GCTGGCGCGA CTCCCTGCCC GAGGCACGCA AGTACCTGCC GGCTGCCCGG GACTACCTCG CGGCCTCGCT GTGGCGACGG ATCGGGCTGC GGATCAACGA GACTGTGATG CTCGACGTCG GCGACTGGCA TCCCGAGCTC GGCACCCACG GCAAGCTGCA TGTGCGCCAT GGCAAGGGCA GCCGCGGTCG TGGCGCGAAG GTCCGCATCG TACCGGCCAT CGACGAGGTC GATGCGTTGC TGGAGTGGTG GCTGACCGAC GTGCGACCAC AGTTCGGCGA CGACTACGAG GACCCCAACG CTCCGCTTCT TCCCAGCGAA CGACGCGATC CGATGACGGG ACATTGCACG CGCATCGGTG CCGAGGCGCT GCGCACCGGT ATGGGCGAGG CCGTCGGCCG GTGGCTGCCC GGGTGGACGG GCCGGCTGTC GCCGCATGTG CTGCGGCACT ACTGTGCCTC GCATCTGTAT GAGCAGGGCA TGACGCTCAA GGCGATCCAG GAGCTTTTGG GCCACGGCTG GTTGTCGACC ACGACGCAGT ACATCCACGT CCGCTCCACC CACATCGAGA CGTCCTGGGC AGTCGCCACC GAGCGGACCC TGGCACGCCT TGGCAGCACG GTCAGCACAA CGAGCGAGCG ACCGACGAGC GAGAAGGAGG AGGTTTGA
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Protein sequence | MTLTVVRSLD SARSLRGSVD VEEFEQELID QYSLALGAVG INDKTAAADR SVVFEFAHFL GRPLWTAQVE DADRYLRTAR RERGLARSTV AGKAASLAKF YEFVIVRYQG DIHALFDQVM VQPIDEFNRP RAIAAATSGR IPPRADEVRD LFEGWRDSLP EARKYLPAAR DYLAASLWRR IGLRINETVM LDVGDWHPEL GTHGKLHVRH GKGSRGRGAK VRIVPAIDEV DALLEWWLTD VRPQFGDDYE DPNAPLLPSE RRDPMTGHCT RIGAEALRTG MGEAVGRWLP GWTGRLSPHV LRHYCASHLY EQGMTLKAIQ ELLGHGWLST TTQYIHVRST HIETSWAVAT ERTLARLGST VSTTSERPTS EKEEV
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