| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4712 |
|---|
| Symbol | |
|---|
| ID | 4595348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008697 |
|---|
| Strand | - |
|---|
| Start bp | 11586 |
|---|
| End bp | 13151 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639772501 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919161 |
|---|
| Protein GI | 119714019 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.188886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTCT ACGGAGCATC CGCAACCCGA GACCGGCAGG CCTGGCTCTT CGGGCTCACC
GGCCCCCAGT TCTTCATGGT GCTGGCCGCC GGGTTCCCGA CCTGGATGGC GATCGCCATC
GGGCAGTGGC TCGCACTGCT CGGCCTCGTC CCGATGTGGG GCGTAGTTGC GCTACTGATC
TGCCTACCGA TCCGAGGCCA CTCGGCCTTC CAGTGGATCG GCGTCCTGTT CCGGCACCTG
GCCGGGGCAG CGTTTGGCTG GTCCCGGTTC CAGTCCAAGG CCGCCGCCGG CGACCTCGAC
CTCGGCGACG CAGACGACGA TGAGGACGAC GGCGACGCAG ACGACGATGA GGACGACGGC
GACGCGGGCG AGGCGGACCT GCCCGGCATC CTGTCCAGCA TCCAGATCCA CGACGGCCCG
CCGATGACCG GGCAGACCGC ACGCCCGGCG ATCATCCAGA ACCACGCAAC CCGCACGTGG
GCAGCCACCG CGCGGGTCGT CCACCCCGGC ATCGGGATGA GCGACGACGC AGACCGGTTC
CGCATGGGCG CCGGCCTCAC CGAGATGATG GAGGCCGCGA CCGCCGGCAA CCAGATCGAC
CTGATCGTGG TTCAGGTCCG CACCATCCCC GACGACGGCA CCGAGCGCGA CGAGTGGGTA
CGTCACAACG CGCGCCCCGA CGAGCCCGAG GTCTCGGCCC GGGTCAACAC CCAGCTGGAG
TCGATGACCG CCGGCGCGGC CGTGCGCCGC GAGGCGTTCG TGACCGTGGT GGTTCGTGAG
GACGTCATCA ACAAGGACGC CAAGCGCGCA GGGCGAGGCG TGACGGGTCG CGCGCGCATC
CTGTACTCGG TGCTGGCCGA GGTGGAGGCC CGGCTGACCG GCTCGATCGG CTGCACGCGG
GTGAACTGGC TCGACAGCTC CGAGCTCGCC GTGGCGATCC GAACCGGGTT CGAGCCCGGC
GATGCGCCGG CGCTCGCGGA CGCCGCGATC CACCACCGCG AAGACCCGTC GATCGCGGCC
GGTATCCCGG TCGCGGCCGC GGGTCCGACC AATGCGTCGA CCGCACTGCG GTCCTACAGG
CACGGGGAGT GGGAGTCCAT CTCCTCCACG ATCCTGCTGC CACGCAAGGG TGCCCGGATG
GGTGCGCTGG CGCGGGTGCT GGTGCCGTCC CAGCCGGGCG AGCGGCGCGC GCTGACGGTG
TTCTACCGGC CCGTCTCGCA GCAGTCCGCG GACCGGGCCA CCGGACGGGC ACAGATGTCG
GCGGTGATGG CCGGCACGCT GCGTGAGAAG GCCGGCAAGG TTGAGCGGGC CAAGGACCGC
CAGTCGGTCG GCAAGCTGCA CGACCGCGAC GAGAAGCTCG AGATGGGTCG CTCGCTGGTC
AAGGTGTCCT CGGCGATCTC GGTCACGGTT CCGGCCGGGT GGAACGTTCA GGACTTCGGC
CGTCGTCTCG ACGCCTCGAT CCGCATCAGC GGCTTCACCC CGCTCCCTCT GGACGGGGCA
CACGACGCGG CCTTCGCCGT GTCTGCGATC CCGCTGGGGG CAGGCCTGCC GAAGAAGCGC
CGCTAA
|
|---|
| Protein sequence | MSVYGASATR DRQAWLFGLT GPQFFMVLAA GFPTWMAIAI GQWLALLGLV PMWGVVALLI
CLPIRGHSAF QWIGVLFRHL AGAAFGWSRF QSKAAAGDLD LGDADDDEDD GDADDDEDDG
DAGEADLPGI LSSIQIHDGP PMTGQTARPA IIQNHATRTW AATARVVHPG IGMSDDADRF
RMGAGLTEMM EAATAGNQID LIVVQVRTIP DDGTERDEWV RHNARPDEPE VSARVNTQLE
SMTAGAAVRR EAFVTVVVRE DVINKDAKRA GRGVTGRARI LYSVLAEVEA RLTGSIGCTR
VNWLDSSELA VAIRTGFEPG DAPALADAAI HHREDPSIAA GIPVAAAGPT NASTALRSYR
HGEWESISST ILLPRKGARM GALARVLVPS QPGERRALTV FYRPVSQQSA DRATGRAQMS
AVMAGTLREK AGKVERAKDR QSVGKLHDRD EKLEMGRSLV KVSSAISVTV PAGWNVQDFG
RRLDASIRIS GFTPLPLDGA HDAAFAVSAI PLGAGLPKKR R
|
|---|
| |