Gene Tpen_1888 details

Gene Information

• Locus tag: Tpen_1888
• ID: 4600316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008696
• Strand: -
• Start bp: 28869
• End bp: 29591
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639772486
• Product: hypothetical protein
• Protein accession: YP_919146
• Protein GI: 119709806

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.60465
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGCGG ACAGGAGACC GGTCACGAGG GTCAAGTGGG AGACTGACGC GGACGTGGCG 
GCTGGGAGGG ACGTGGTGGC TTGGCTCAAC GACCTGAGCC CCAAGGTTCT GCCGATGGGC 
GAGTACGTGG TGTTGATACA CGACGTCTCA GACCTCCACA GCTTAGCCAT TCTCAGCAGG 
TTGAACAGGA GGTGCACCTT CATACTGGAG TTTCCTGTGG ACGTTGACCC TGCCTTCGCG 
TTCACCGTCT TCGAATTGCT GAGGTTCAAC CCCCGAATCA GGTTCAGAGA CCCCTCGTTC 
AGCTACCTGA GAGGCGAGCT TGCGAGGCTT AGACCGGGCG AGGACACCGT GGTGACGGGG 
CACTTGGTGT GGCGGGGCGA TTTCAGGGCT ATACTGGCTC GGAGAAACTC GTTCTACGTG 
GCTCCACAGC TTGGCTACGT GGCTAGCGGC TACTTCACGC CGGACAACGA CCCCTACCTC 
TACTACGTCT CGAGGGTTCA GGGCTTGAAG CCCGAGGTCG TCGAGGTGCC CCTTCAACCG 
GTAGAGGTCA AGCCCCCGCC TCCCCCCGTG CCCGTCAAGC CGCGGCTCCC CCGCGAAAAG 
CCACAAAATT TTGTGGCTAA TCCCGAGGGG GGCGGAGAAG AAGGGGAGCC CGAGTTCGAG 
GAGGTGGACT TGGAGGAGTT GGGCGAGGAG GAAGAAGGGG GAGAAAAAGA GGAGGGTTTT 
TAA 

 

Protein sequence

MSADRRPVTR VKWETDADVA AGRDVVAWLN DLSPKVLPMG EYVVLIHDVS DLHSLAILSR 
LNRRCTFILE FPVDVDPAFA FTVFELLRFN PRIRFRDPSF SYLRGELARL RPGEDTVVTG 
HLVWRGDFRA ILARRNSFYV APQLGYVASG YFTPDNDPYL YYVSRVQGLK PEVVEVPLQP 
VEVKPPPPPV PVKPRLPREK PQNFVANPEG GGEEGEPEFE EVDLEELGEE EEGGEKEEGF