Gene Tpen_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1887 
Symbol 
ID4600321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008696 
Strand
Start bp28378 
End bp28872 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID639772485 
Producthypothetical protein 
Protein accessionYP_919145 
Protein GI119709805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.417541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGCC CGATAATCCT GCTCCTGTTG ATATGGCTGG GCACCAGCAT AGGCATAGTG 
TTCGTGACCC TCAACGAGTA CATCAAGGAG AACGGAAAGC TCGACGTAGC CGCCGCGTTA
TTCGCACTAA GAGAACTATC GGCGATTGCC CTCCAGTTCA TATGGCTGAT AGTCCTCCTC
CACGTCTGGG GCTTCCTAGA CATCAGAACC GAGCTGGGTT GGACGGCGCA GATACCCGAT
TTGAGCACGC CTCAGGGGCA GGCGGCGTAC GTCTTCATCT TCGCGAGTCT GGTAATCATC
GCAATCCTCT ACGCTGAGGG ATACGTCAAC CTCGCGTTCA CGGTGGCGGT GTTCAGCGGG
GTAGCGATGC TCGGCTACAT AGACGCCAAC GTGTACTTGC AGTTGCTCGG CATAGGAGTA
GCGATGCTCG CGGTCTTCGC CTACGTCTTC AGGAGCGAGC TAGAAGAAGA GCTGAGGCGC
TGGAAACTCC GTTAA
 
Protein sequence
MISPIILLLL IWLGTSIGIV FVTLNEYIKE NGKLDVAAAL FALRELSAIA LQFIWLIVLL 
HVWGFLDIRT ELGWTAQIPD LSTPQGQAAY VFIFASLVII AILYAEGYVN LAFTVAVFSG
VAMLGYIDAN VYLQLLGIGV AMLAVFAYVF RSELEEELRR WKLR