Gene Tpen_1883 details

Gene Information

• Locus tag: Tpen_1883
• ID: 4600303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008696
• Strand: -
• Start bp: 26940
• End bp: 27542
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639772481
• Product: hypothetical protein
• Protein accession: YP_919141
• Protein GI: 119709801

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.213169
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTTC TCCACCACTT CATCGGGTAT AGGGGGGCGC GGGGGCTTTT TAGGCTGACG 
GTAAAGCCAC AAAATTTTGT GGATTTTCTG CGCGGTGGCT TTATAGCCCG CGCCAGCTCC 
TTCAAGCATA TGAGCGGGGA AAAGCCTGAG GAGAAAAGAC CGGGTAGAGG CACCGTTGAG 
GAGCTGGTAT GGGTCTTGGG GCACCTCATA AACTTGGAGG AGCATAAGTG GGAGATGGGG 
GAGGTCGAGG AGGCTACCGC GATAAAGGAG GTTAGGCGCG ACTTCGTAGC CCAGCTTGCA 
AAGGAGCTTA AGTGGGCTTG CAAGTGGAAG CCCCAGTGGT GCGTCTTGAA GCATCTATCC 
AGCCTCATAG TCCACGTAGA GGAGGCCGGC ACGAGCGGGG ATTTGAGCCC CGAGACCGTG 
GAGAAGCTTC AGGCTTTGTA CAAGACCGCT TGGGTGGCAA TCGAGACATT GCTGGAGGAG 
TGGGGTAGCT TGGGCTTCGC CGCCGAGGAG ACGGATAGGC TCAGGGAGAC GGTCACTCAG 
GCTCTCAAAG AGAAGGGTAT AGACGCGGCT AAGCTGATAA GGGAGGACAG GGACAGCCGA 
TGA 

 

Protein sequence

MSFLHHFIGY RGARGLFRLT VKPQNFVDFL RGGFIARASS FKHMSGEKPE EKRPGRGTVE 
ELVWVLGHLI NLEEHKWEMG EVEEATAIKE VRRDFVAQLA KELKWACKWK PQWCVLKHLS 
SLIVHVEEAG TSGDLSPETV EKLQALYKTA WVAIETLLEE WGSLGFAAEE TDRLRETVTQ 
ALKEKGIDAA KLIREDRDSR