| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1866 |
|---|
| Symbol | |
|---|
| ID | 4600331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008696 |
|---|
| Strand | + |
|---|
| Start bp | 15432 |
|---|
| End bp | 17306 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639772464 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919124 |
|---|
| Protein GI | 119709784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGA AAAGGTACAT ACCCCTGTTA CTGCTACTGG TAACGGTAGC CTTGGGCATC
GCCACCGTAA AGGCGGCTCC CGTCACGACT TACACGGTCT TCGTCAACTA CACCATGTAC
ACGGGCACCG CTCCAGCCGC GGGTAGCACC TACTGGTTCA ACTTCACAAT CACTCCAAGC
CTCGACGTCG TCATCGTGAC GGTAGAGGAC TTGGGAGGCG CTAGCCAGAG GACGGTCTAC
GTGGACAACG TGGCTGTAAC CCTGCCCTAC AAGCTGAAGG CTGGAGAGAC CCACAGGGTA
GCCGTCAAGG TCTACTTCCC GAGCGCGCTG ACTGTAGCGT GGTTCGGCAA GACGATACTC
GCCTACAACA GGACTGAGGA CGTAAACCTG CAGGTAAAGT ACGTGGGCTA CGGCTTCGAC
TCCGTGTCCT ACGGGAGCTA CGTGGGTAGC GTGGACAACG TGGCAACGCT GACCGTCAAG
CTGGACACGC CTTACACCAT GGGGGTCACA CACACGTTCA GCTCTGTGTC CACGGTCGTC
TGGCTCAGGT TCCACCCGGC GATGCCGATT AAGGGCTACA CGGGCACCGC CTACTACACC
ACGACCTTCA ACGCCTACAC GATTGGAAGC CAGCCCGCGG GCACCGATAG CTACACCATC
TCCAACAACC CGGTAACCGT CACGGTTGAC TGTCCACCGC CAGTAGGGCT CTACGAGCTT
GTCTGGTACG TGAGCTGGGG AGGCTTGACG GAGAAGATGC TCGGGGCGCC GGGCACCCCC
ACCCCCAACA AGAACTACGC TAGGCTGGTC GGCGCCACGT TTACTTGGAA GTTCACCCCC
AACGCCACGT ACTTCCCCAC GACCAAGGTT GACGAGTACC TCTTGGTGAA CGGTAGCAAG
GCTTCGAGCC TCGCGCTGAG CAAGAAGGGG CTCTACAACG CCACCTTCGT CAACATCGGA
AAGATGAACA CCACGTTCTA CGGAGTGCTG GCATACCTGC CCCCCGTGGT CAGGGCGGGT
ACCATGTACG TCTACGCCGC GGAGCTTAAG GTCAACGTGC TCTCTCAGGT AGGCACGGTG
GGAGCCCCGA GCCCCGGCTT CACTCTCAGC TTAGCCGGCG CGAACGCTCC CGGCTACTTC
GCGCTTCAGG TCAAGGTGCC CGAGGGAGTC GTCACGGTCG AAAAGGCTGA GGGAGTGGCG
TGGAACAGGA CTGTGCTCCC CGGCATAGCC AAGGACGTCA AGACGAGCCT CGACGCCGAT
AAGCTGGTCT ACACCGTGAA CTACACGTAC ACGCTGTACT ACGCGCCTAT AGTGGGAGGC
GTCAACTTCC TAGGCGCGTG GGGCATAGAG GAGACTCCGA GCCTTACGCC GACGAGCCCG
ACTATAGCCA CTCTGACTGC CAGCAAGCCA GTGGTGCTCA ACGCTACTAG AAACGTGATA
AGGGTCTTGG ACTCCGCGGG CAACGACGTC AGCTTCGTCG GGAAAGCCAT AGCGATAAAG
AGTAGCGGCA CCTACACCGT CAAGCTTGAG ACCGTGATAA AGGTCGTCAA CCTCTACCAA
GGCAAGAAGA TACCCGCCAC GGTCAGGCTC TACGACGCTA AGGGCTTGCG CCTAGCGGAG
AAGACCGGGG AGGAGGTAAC GTTCACGGTT GAGCCCGGAC TGCTCTACAC GGTCGAATCG
GACAACGGTA ACGAGGTGCT GACTCAGCGC GTCACGCCTA CACAGGACGT CGATGTAACA
ATGGAGTTCA CGAAGCCTCC CGCCGTGGTA ATTCCGTGGG AGTGGGTGTG GCTAGCGCTG
GCCATAGTGT TCCTAGTGGT TCTGATATAC TTCGCTAAGA GGCTCAAGGA GGGTCTAGAG
ATAGTAGTGG GGTAA
|
|---|
| Protein sequence | MGMKRYIPLL LLLVTVALGI ATVKAAPVTT YTVFVNYTMY TGTAPAAGST YWFNFTITPS
LDVVIVTVED LGGASQRTVY VDNVAVTLPY KLKAGETHRV AVKVYFPSAL TVAWFGKTIL
AYNRTEDVNL QVKYVGYGFD SVSYGSYVGS VDNVATLTVK LDTPYTMGVT HTFSSVSTVV
WLRFHPAMPI KGYTGTAYYT TTFNAYTIGS QPAGTDSYTI SNNPVTVTVD CPPPVGLYEL
VWYVSWGGLT EKMLGAPGTP TPNKNYARLV GATFTWKFTP NATYFPTTKV DEYLLVNGSK
ASSLALSKKG LYNATFVNIG KMNTTFYGVL AYLPPVVRAG TMYVYAAELK VNVLSQVGTV
GAPSPGFTLS LAGANAPGYF ALQVKVPEGV VTVEKAEGVA WNRTVLPGIA KDVKTSLDAD
KLVYTVNYTY TLYYAPIVGG VNFLGAWGIE ETPSLTPTSP TIATLTASKP VVLNATRNVI
RVLDSAGNDV SFVGKAIAIK SSGTYTVKLE TVIKVVNLYQ GKKIPATVRL YDAKGLRLAE
KTGEEVTFTV EPGLLYTVES DNGNEVLTQR VTPTQDVDVT MEFTKPPAVV IPWEWVWLAL
AIVFLVVLIY FAKRLKEGLE IVVG
|
|---|
| |