| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1865 |
|---|
| Symbol | |
|---|
| ID | 4600300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008696 |
|---|
| Strand | + |
|---|
| Start bp | 14866 |
|---|
| End bp | 15402 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639772463 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919123 |
|---|
| Protein GI | 119709783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTG ATAGACGTCT TGGCTTTCGG CTTAGCCGCG CTCTTCGTCC TAGCGTGGTT
CGTCTACACG GTGAGGCTGG CGGTCAAGCC CAGCCTTTTA TTCCCCTTCG AATTCGTCGT
CTCCGTCTTC TTCCTCCTCT TCTTCCTAGC CCTGCTCCTA GCGGTGCACG AGGCGGTGAA
GGAGTCGTGC AGAGAGAGGT GAAGCTCTGC CTAGCCCTAG CGGGTCTCAG CAGGGTAGCC
GACATGGCTA CAACCCTGCC GATACTCCAG AAGTACGGGC TACAGGGGGA GCTGAACCCC
GTGGCTCGGG CGTTTTTCGG CATGGGCGTA ACCGGCATAG CCTTCGCCTT GGTCGCCGGC
ACCGTTCTAA GCGTCTTTCT CGCGTGGGTC AACTGGAGGA GGGGCGGGAA GAAGTACCTC
TACCTGTTCA CCGCTTTCCT CTGGATACCC TTCTTCAACA ACATTGTCGC ATACTTTAAC
GCCCGCAACT ATACACTCGT GGACTTTCTT TTCCTAGCCC TCCGACCTCT ACCTTAA
|
|---|
| Protein sequence | MRIDRRLGFR LSRALRPSVV RLHGEAGGQA QPFIPLRIRR LRLLPPLLPS PAPSGARGGE
GVVQREVKLC LALAGLSRVA DMATTLPILQ KYGLQGELNP VARAFFGMGV TGIAFALVAG
TVLSVFLAWV NWRRGGKKYL YLFTAFLWIP FFNNIVAYFN ARNYTLVDFL FLALRPLP
|
|---|
| |