Gene Tpen_1858 details

Gene Information

• Locus tag: Tpen_1858
• ID: 4600325
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008696
• Strand: +
• Start bp: 12044
• End bp: 12730
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639772456
• Product: hypothetical protein
• Protein accession: YP_919116
• Protein GI: 119709776

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.285489
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAGGA GCGTAGTAGC GCTACCGCTA CTACTCCTAG CCCTGCTAAC CGTCAACGCC 
GTGCCGGTCA ACCCTCCAGC CTACACACTG GGAGTCAGCG TGACGCTTGG AGGAGAGGAG 
GTGCCCGAGC CCGTAGCCGT CGTGTTGAGG GTGGCTTTCA ACAAGACGCT CACGGTCAGG 
TTCATCGGGG AGTCCAACGG GGAGAAGGTC GGGCTAACCG TAGCGTACAA GGTTAACGGC 
ACGGAGAGGA CTGCCACCGC CGGCGTGGAC GCGTTGAACG TGACCGCGGC TTACATCACG 
CCTATCATAT ACGTATTCAC GGTGCCCCAG AACGTCACGG TGGGAGGGAC AACCTACAAG 
CTGAGCAATA GCTCGACGGC TACGGTTGAC CCCGTATCTA CGGACACCGT GCTCTTCGTC 
TACACCGCTC CGTCCACGGC TCCGCCTAGC GGTGGCGGTG GAAACCAGCC CACGGCTCCG 
ACGATGCCGT CTCAGCCCTC CATCAACACT CCATCGGAGA AGAGTAGGAT AAACCTAGGC 
GAGCTTCTGG TCTGGGTTCA AGGGGTCTTA GCATGGCTGA TGGAGCACCC CGAGTACCTA 
CTGCTGATAG TCCTAGCCCT GCTCGTAGTG CTGGTAGCCT ACTACCTGAA GAAGAGGCGG 
GAGGAGCTGG TCATAGAGAT AGGGTAA 

 

Protein sequence

MRRSVVALPL LLLALLTVNA VPVNPPAYTL GVSVTLGGEE VPEPVAVVLR VAFNKTLTVR 
FIGESNGEKV GLTVAYKVNG TERTATAGVD ALNVTAAYIT PIIYVFTVPQ NVTVGGTTYK 
LSNSSTATVD PVSTDTVLFV YTAPSTAPPS GGGGNQPTAP TMPSQPSINT PSEKSRINLG 
ELLVWVQGVL AWLMEHPEYL LLIVLALLVV LVAYYLKKRR EELVIEIG