| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1857 |
|---|
| Symbol | |
|---|
| ID | 4600320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008696 |
|---|
| Strand | + |
|---|
| Start bp | 10818 |
|---|
| End bp | 12032 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639772455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919115 |
|---|
| Protein GI | 119709775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.492563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATGT ACGCGTCGAA CACGGTGAGT ACCGCCGCCC TCAATAAACC GTTAAATAGG
CCTCTAAACA CGTCTAAAGC GATGCGTATG GACAAGAAAA AGCTGTTGGT AGTAGCGTTA
CTGCTAGCAG TTGTAGCCGG AGCCGTCTAC CTCGCACACC TAGACGCCGA CAAGAGGGAG
GTGCCCTCCG AGACCATCGA CACAGGCAAG TACATAGACG CCTACGTCTC CGTCTACGTC
AACGGTAGGC TCGCGGCTAC CCAGAGGATG CACAGCTTTA CGAGCGCCTT CTCCTACCTA
GCGCCCATAG CGTTCACGCC TACCTCCAGC TTCACGCAGA CTTCCACGTT TACCGGAGTG
GTGGAGCCCG TCTCCGCGTA CGGCGCGGCG CTGACCCCGG GGAGCTACAG CTGGATACTG
CAGAAGGGCA GGTTCTACGG GTGTCCGGCG AGCGCGGCGA GCCCGTGGCA GGTAGCCATA
ACGCAGACCC CGCTTCCTAG GCTGGTGGCG GTCTTCTACA ACACGTCCGG CTCGAAGATA
GGGGAGGCGG TTTTCTCCGG TACGAGCGTA GACCTAGCGA ACAAGGTGGT GAACGCTACC
GGCACGGTGC TGTACTTAAC CGCGAGCTTC ACCTACACCG GTGCTACGGC CACCAATATA
AAGGAGGTGC ACTTGGCTAG ACCCACCGGA CAGGTATACT CGCTGGCACC CGGGGCTTCG
TGCGGCGGGA TGAGGATTAC TAACGACTCG TTCGCCACGG CTATAACCGT CAACCCCAAC
GACGTCGTTA CAGTCGTCTA CACCTTCTAC TTTAAGAAGC CCCTGACCAC CAACTTCGCC
TACATGTTCC TAGCATTCCT CTACAACGCG AAAGACCAAG TCGTGCCGCT CAACGCTACG
GACGGCTCCA CCTTCACCTT CAACGTCGCC GTCGCCGTCC CCATAAACAC CACCATATCT
GTCTTCACGT CGAGCGGCAC CGTCTCCGTG AAGGAGCCAA CCGTCACCGT GGGCCCGGGG
GTATGGGCGC TGAGCCAAGC CTTCAAGTTC ACCAGCAACG ACTACGTGAC TAGGATACAG
CTGAGGGTTA GGTTCGAGAA CGGGAAGGAC GTCGTGATAG TGGACTACGT GCCGAGCCAG
CCGATACCCG TCAAGCCCGA TAGGCCCTAC ATCTTCAGCG TGAGCTTCAG CTACCCCTTT
GTAAACAAGC CTTAA
|
|---|
| Protein sequence | MVMYASNTVS TAALNKPLNR PLNTSKAMRM DKKKLLVVAL LLAVVAGAVY LAHLDADKRE
VPSETIDTGK YIDAYVSVYV NGRLAATQRM HSFTSAFSYL APIAFTPTSS FTQTSTFTGV
VEPVSAYGAA LTPGSYSWIL QKGRFYGCPA SAASPWQVAI TQTPLPRLVA VFYNTSGSKI
GEAVFSGTSV DLANKVVNAT GTVLYLTASF TYTGATATNI KEVHLARPTG QVYSLAPGAS
CGGMRITNDS FATAITVNPN DVVTVVYTFY FKKPLTTNFA YMFLAFLYNA KDQVVPLNAT
DGSTFTFNVA VAVPINTTIS VFTSSGTVSV KEPTVTVGPG VWALSQAFKF TSNDYVTRIQ
LRVRFENGKD VVIVDYVPSQ PIPVKPDRPY IFSVSFSYPF VNKP
|
|---|
| |