Gene Tpen_1852 details

Gene Information

• Locus tag: Tpen_1852
• ID: 4600329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008696
• Strand: -
• Start bp: 6813
• End bp: 7586
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639772450
• Product: hypothetical protein
• Protein accession: YP_919110
• Protein GI: 119709770

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.586434
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCGTC CCAAAAAGCT TAGAAACGCT AAGGTCGTGC CTTTGGTCTT GGAAGGTGAG 
CTTTACGAGC AGGCTAAGCG CATCGCGGCT CAGCTCGGCG TAAGCGTAAG CGAGTATGTT 
AGACAGGCGC TCAAGGAGAA AATCGAGGCG GACAGCGTGA GGCTCGGGCT CAGCAACGTG 
TTCGAGGAGA AGGCTGTAGC TCAGGCGCGC GATGGAAGCC TTACGGCGGA GGTGGCGGGC 
GTGCCCCCCT TGGCTGTAGC ACAGTTCAAT GATTTCGCTA GGAGCTGGGA GGAGCTGAGA 
CCTGCGCTCG CAAAGGCTGT CGATGAAGTG AAGATGCTGT GGGGGGAGTG GCAGGGGCTG 
GATGAGGAGG CTAGGCATTA CGCCGAGAAG GAGGTACCGC CGCATCTACA CGATAAGTGG 
GTGAAAGTGG AGGGTAGAGG GGAGATGTGG GGGCGTCAGG CTTTCCAAGC TTTCGTGGAG 
GAGTATAAGG CGAAGAGGAT GAAGGAGCTG GCGGGAAGGC TGAGGGAGGT TGACGCGGTC 
ATTTCTAGGT ATTGGAAGCT CTACTACGTC TGGATGAAGC TTAGAAAGGA GGTTTTCAGG 
GACGATAACA AGGACAAGGA GATGCTGTCG AGGGCGGCTA AAATCGAGGC AGAGCTTGCT 
AGGATGTATG AGCGTATCGC CGAGGTTAGA AAGGAGAGGG AGGAGCTTAG GCGAGCCCTT 
TACGGCTCTC AGAAGAAGGG TCGCCGGGGC TTTTCGACGG CGCGGAGACA GTAA 

 

Protein sequence

MPRPKKLRNA KVVPLVLEGE LYEQAKRIAA QLGVSVSEYV RQALKEKIEA DSVRLGLSNV 
FEEKAVAQAR DGSLTAEVAG VPPLAVAQFN DFARSWEELR PALAKAVDEV KMLWGEWQGL 
DEEARHYAEK EVPPHLHDKW VKVEGRGEMW GRQAFQAFVE EYKAKRMKEL AGRLREVDAV 
ISRYWKLYYV WMKLRKEVFR DDNKDKEMLS RAAKIEAELA RMYERIAEVR KEREELRRAL 
YGSQKKGRRG FSTARRQ