Gene Tpen_1843 details

Gene Information

• Locus tag: Tpen_1843
• ID: 4600299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008696
• Strand: -
• Start bp: 3012
• End bp: 3572
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 639772441
• Product: hypothetical protein
• Protein accession: YP_919101
• Protein GI: 119709761

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACTTGG ACAGGGCGAT TAAAACCGTG GGCCTCGTGA ACGCCGTGCT CACCACGGTG 
CTGATAACGC TCTGGGTCAT AGCCGCGTTT AGGAGCGTAG TCGTCACGGC AGAGGTGGCA 
GGCATACCCT TGGTGCCCCC GCTCGCCGCT ACCCAGCCTA GCCCCGAGAC GGTTGGCAAG 
GCGATTATAA GCCTGCTCTA CACCGTCTTC AAGTACGTAA TCTACGCCGT CATAGTGATA 
ACGGGTATAT ACGTGGCGCT GGGCTTGGTA GCCAACTTCG TAACCGCCTT CCTCCCCATA 
ACGGTGCCTA GGGCTACCCT CAACACGCTG ATAAAGAACA TCCTAGCCCT CTTCATCATC 
AAGCTCGTGG TGGACGCGAG CCTCAGCTAC TTCGGCTACT CCGCCGACGT AGCGGAGAAC 
ATGGCTGTCT TGGAGGGCGT GGGCGGAGCC CCGTCGCTCC TGCTAATAGC GGCTATGGTT 
ACGGGCGTAG CGGTGGCAGT CTACTTGGTG TACAGGGCTC TCAAGAAGAG GCTCGGAGAG 
GTAGAGGTGG TGCTTGAGTG A 

 

Protein sequence

MDLDRAIKTV GLVNAVLTTV LITLWVIAAF RSVVVTAEVA GIPLVPPLAA TQPSPETVGK 
AIISLLYTVF KYVIYAVIVI TGIYVALGLV ANFVTAFLPI TVPRATLNTL IKNILALFII 
KLVVDASLSY FGYSADVAEN MAVLEGVGGA PSLLLIAAMV TGVAVAVYLV YRALKKRLGE 
VEVVLE