| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5131 |
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| Symbol | |
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| ID | 4583692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 646603 |
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| End bp | 649128 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772434 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_918887 |
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| Protein GI | 119387853 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.112839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTC TTACCTGCGT GCCGGTGGCG GCTGCCCGCG CCCTCGCGTT CTCGACCGGC
CTGGCCGTGC CGCGCAATGC CCTGCGGGCG CTGCTGATCG GCACGACCCT TGGCGCCGCG
ATCACCGCGC CCGCCTTCGC CCAGGCGCGC GACTATGCCA TCGGCCCCGG CCGGCTCAGC
GACGTGCTGG CGCGCTATGC CGCCGCCTCG GGCGTGCAAC TGGTCTATGA ACCCTCGGAT
CTGGCCGGAA TACGCAGCGC CGGGCTGCAG GGCAGCTATA CGGTCGAGCA GGGCTTTTCG
GTGCTGCTGG CCGGCAGCGG CTATCGCCTG CAGCAGGCGG GACCGGGAAG CTATGTGCTG
GTGCGGCCGC CGGTGCAGGG TGCTGCGGTG CCGGCCGGCG AGGGCGCGGT GGTGCTGGAT
ACGGTCACGC TGCGGGGCGG CGGCGCCACG ACCGAGGGCA GCGGTTCCTA TGCCAGCGGC
GCGGCCAGCA TCGCGCGCGG GGCGGATTCG CTGAAAGAGG TGCCGCAATC GGTGACCGTG
GTGACCAAGC AGGCGCTGGA CGACCAGAAC CTGACCACCA TGTCCGAGGC GATGGCCAAG
GCGCCCGGCA TCGTCGCGAC CACGGACGGC ATGGGCCAGC CGGTGTTCTA TTCGCGCGGC
TTCGTCATCG ACAACTACCA GATCGATAAT CTGGGCACGT CCTACGATTC GACCTTCAAG
CCGGATTTCG ACATGGCGAT CTATGATCGG CTGGAGATCC TGCGCGGCGC CGAGGGGCTG
TTCTCGGCAG CGGGCGAGCC GGGCGGCACG ATCAACCTGG CGCGCAAGCG CCCCACGGAC
GAGCTGCGCT CGGCTGTGTC CTTGGCCTAT GGAAGCTGGA ACAACCGTCG GCTCGAGGCC
GATATCGGCG GCCCGCTGGG GTTTGACGGC AAGCTGCGCG GCCGCCTGGT CGGCGTCTGG
CAGGACCGCG AATATTTCTA CAAGCCCGCG GATGAGGAAA AGCGGGTCCT CTACGGCATC
CTAGAATACG ATCTGACGCC TTCGACCACG CTCAGCGCCG GCGTGAGCTA CCAGCGCCAA
TACGGCACCA TGTGGCAGCG AGGCTTGCCG ACCTATGCCG ACGGCAGCCA GCTTGGCCTG
CCGCGCGACG TGGCGCTGAC GGTGGACTGG GCCAAGCGCG AGCAGACCAT CCGCGAGCTT
TTCGCCTCGG TCGAGCATCG GTTCGATTCG GACTGGACGC TCAAGTTCAG CGCCGCGCGG
CAACGCTTTG ATTTCGATTA CCTCAACCTC AGCCTCGGCG GTCCGATCGA TCCGTTGACG
GGTTCCTTCG GCGCCCCGGA CGCATTTTCC GAAGACGACG GTAACCACTC GGACGGGGTG
GACCTGAGCC TTTCGGGCCG CTTCGATGCC TGGGGCCGGG AATACAAACT GACGATGGGT
GCCGACTGGC GGCGCAGCTA CGGCAAGCAG ATGCGCAACC GCGTTGGCAC GGCGTTTCCC
GATGGCGAAA TCGGGGTGGA CGACTTCCCC GGCCTGGATC TGCCCGCGCC GGTGCGGGGC
AGGGCCGGAT CCGGTTGGCC AACATTCGGC AGCAAGCAGC AGGGCATTTA TGCCCGGCTG
GACATGCAGG CGACCGACAG GATGCATGTC ATCGTCGGCG GCCGTTATGG CAGCTACAGG
CATTCCGAGA TTGAGGAGAG GTATGACGAG GATGGCAACG TCACCTATCG CGACACCAGC
TGGCGCTGGA GCGAAAACGG TATCTTCACG CCCTATGCCG CCGTCACCTA TGATCTGACG
CCCGACTGGA CCGCCTATGC CAGCCTGACC GAGATCTATA AGCCGCAGGG CAACACCTTT
GCCGGCCCGC CCGATAACCC GACCCAGTTG GACCCGATCA CCGGCCGCAA CTACGAACTG
GGCGCCAAGG GGGCCATCAT GGGCGGTGCG CTGAACGTCT CGGCGGCGCT CTATCGCATC
GAGCGCAAGG GCGAGAAGGT GGTGGACCCC CGCTATGAGG ATGAGCCCCG CGACTATTAC
CTGCCGCTTG GCGAGATCGT CAGCCAGGGC ATCGACCTCG AGGTCTCGGG CGAGGTCGCG
CCGGGCTGGC AGGTCTTTGC GGGCTATACC TACAACCATA ACGAGAACAA AAGTGAGAAT
GACGTCTATC ACGCGTTGAC GCCCAAGCAC ATGTTCAAGC TGTGGACGGA CTACACCCTG
CCGGGTGACT ATTCCAAATG GACCGTCGGC GGCGGCGTGA CGGTGAAAAG CCGGCACGCG
AACAGCGGCA CCTATTGGTT CATGACCCCG GACGGCTGGA CCCAGCCGGA ATTCGAGATC
AGGCAGGGCG GATACTCGGT CTGGGATGCG CATGTGCAAT ACCAGATCGC CGAGCAATGG
GCGCTGGCGC TGAACGTGAA CAACGTCTTC GACAAGACCT ATTATGCCAC CATCGGCACC
CCGGGCGGCG GCAATTGGTA TGGCGAGCCG AGGAATGCCA CGCTGACCCT GCGGGGGCGG
TTCTGA
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| Protein sequence | MNSLTCVPVA AARALAFSTG LAVPRNALRA LLIGTTLGAA ITAPAFAQAR DYAIGPGRLS
DVLARYAAAS GVQLVYEPSD LAGIRSAGLQ GSYTVEQGFS VLLAGSGYRL QQAGPGSYVL
VRPPVQGAAV PAGEGAVVLD TVTLRGGGAT TEGSGSYASG AASIARGADS LKEVPQSVTV
VTKQALDDQN LTTMSEAMAK APGIVATTDG MGQPVFYSRG FVIDNYQIDN LGTSYDSTFK
PDFDMAIYDR LEILRGAEGL FSAAGEPGGT INLARKRPTD ELRSAVSLAY GSWNNRRLEA
DIGGPLGFDG KLRGRLVGVW QDREYFYKPA DEEKRVLYGI LEYDLTPSTT LSAGVSYQRQ
YGTMWQRGLP TYADGSQLGL PRDVALTVDW AKREQTIREL FASVEHRFDS DWTLKFSAAR
QRFDFDYLNL SLGGPIDPLT GSFGAPDAFS EDDGNHSDGV DLSLSGRFDA WGREYKLTMG
ADWRRSYGKQ MRNRVGTAFP DGEIGVDDFP GLDLPAPVRG RAGSGWPTFG SKQQGIYARL
DMQATDRMHV IVGGRYGSYR HSEIEERYDE DGNVTYRDTS WRWSENGIFT PYAAVTYDLT
PDWTAYASLT EIYKPQGNTF AGPPDNPTQL DPITGRNYEL GAKGAIMGGA LNVSAALYRI
ERKGEKVVDP RYEDEPRDYY LPLGEIVSQG IDLEVSGEVA PGWQVFAGYT YNHNENKSEN
DVYHALTPKH MFKLWTDYTL PGDYSKWTVG GGVTVKSRHA NSGTYWFMTP DGWTQPEFEI
RQGGYSVWDA HVQYQIAEQW ALALNVNNVF DKTYYATIGT PGGGNWYGEP RNATLTLRGR
F
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