Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5128 |
Symbol | |
ID | 4583689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 644002 |
End bp | 644772 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772431 |
Product | ABC transporter related |
Protein accession | YP_918884 |
Protein GI | 119387850 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.012319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTATCC ACCAGTCCCT TCTGCGCGGA GAGGTCAGGG TGCGCGGCCT TTCCAAGTCC TATTCGCTGA ATCGCAACGC GCTTTCGGTC CTGCGCGATC TGGATCTGGA CGTGAACGGC GGCGAGATCC TGGCCATCGT CGGTCCTTCG GGCTGCGGCA AGACCACGCT GCTGCGGATT CTGGCGGGGC TCGAAACCCC CGATCGCGGC AAGGTGCTGA TCGACGGTCG TCCCGTCGCC GGGGTGGGGC GCGAGCGCGC GGTGATCTTT CAGGAACCGC GCCTGCTGCC CTGGCTGACC GTGCTGGACA ACGTCGCCTT CGGGCTGGAG GTGCGCGGCA TCCCGGCCGC CGAGGGTCGC GAAAGGGCGC GGCACTATCT TCGCCTTGTC GGCCTGGCCA GGTTCGAGGC GGCCTGGCCG CGCCAGCTTT CCGGCGGCAT GGCGCAGCGC GTGGGCATTG CGCGCGCTCT GACGGTGCGA CCGGGGATCC TGCTTCTGGA CGAGCCCTTC GGTGCGCTGG ACGCCATGAC CAAGATGACG ATGCAGGAGG AACTGGCCCG CATCTGGCGC GAGGAACGGG TGACGATGAT CCTTGTCACC CACGACCTCG AAGAGGCGAT CTTCCTTGCC GACCGGGTTC TGGTGCTGTC GAAGGACAGC ACTGATCCGG CACGGCTGAT CGATGTCGAC CTGGCGCGTC CGCGCGACCG CAGCGAGCCG GGCTTCGTCG CCATGCGCCG CCGCCTGATG GCGGAGTTCG GCCTGCATTG A
|
Protein sequence | MGIHQSLLRG EVRVRGLSKS YSLNRNALSV LRDLDLDVNG GEILAIVGPS GCGKTTLLRI LAGLETPDRG KVLIDGRPVA GVGRERAVIF QEPRLLPWLT VLDNVAFGLE VRGIPAAEGR ERARHYLRLV GLARFEAAWP RQLSGGMAQR VGIARALTVR PGILLLDEPF GALDAMTKMT MQEELARIWR EERVTMILVT HDLEEAIFLA DRVLVLSKDS TDPARLIDVD LARPRDRSEP GFVAMRRRLM AEFGLH
|
| |