| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5118 |
|---|
| Symbol | |
|---|
| ID | 4583679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 636385 |
|---|
| End bp | 637719 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772421 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_918874 |
|---|
| Protein GI | 119387840 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.917814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCC AGTTTCCTCA GGACGGTCAT CGTCACATCA TCATCGTCGG CGGCGGTGCA
AGCGGGGTGC TTGCCGCCGC CCATCTGCTT AGGAACGATC CCTTCCTGCG CATCAGCATG
ATCGAGAAAT CGCACAGCCT GGGATGCGGC ATCGCCTATT CGACGGATGA TCCGGGTCAC
TTGCTGAACA CGCGCGTCCA TAACATGAGT GCCTTTCCAG ACGATCCCGA GCATTTCCTG
CGCTGGCTGC ACAGCTCGGG CGAGGCGCCG GAGGCCACGC CCGATTGCTT TGCCGGCCGG
ACGGCCTATG GCCGCTATCT GGAAAACCTG CTTACCGCCT GGGGCGGGGA CCGGCTGACC
TGCCACCGCC AGGAATGCCT GCGCATCGAG GAAAAACCCG GTTGCGTGCG GGCCTGCCTG
GAGGATGGCA GCGCGATCAT GGGCCACCTG GCCATCCTTG CCACCGGCCA TGCGGTTCCG
CAGCATCCCC CCAAGGGCAT GCGCGGTGGT TGGGACTTTG CGCCCCCGGC CGATTCCGGG
GCCGATGTGG TCATCATCGG CACCGGCCTG TCGATGGTGG ACCATGTGGT TACGCTGCTT
GGGCGGGGGC ATCGCGGCAG CATCACCTGC CTGTCGCGGC GCGGGTTGCT GCCGCGCGCC
CATGCCGCCA GCCGTGCCAT GGCGATCGCG CGCGACGAGA TTCCGCTTGG CGCCCCGGTC
AGCCGGGTGC TGCACTGGCT GCGGGCGCGC ATCCGCCAGG CCGAGGCCGA AGGGCTTGGC
TGGCGCGATG TCCTGGACGG GCTGCGTCCC CATGTCAGCG CGATCTGGCA GGGTTGGGAC
GAGGACAGCC GGCGCCGCTT TCTGCGCCAC GCCGCCTCGT GGTGGGAAGT GCATCGCCAC
CGCATGCCGC CGCAATCGGC CGCACTGATC GCCGATGCCC AGGCGCGGGG CCAGTTGCAT
GTGCTCAGGG CCCGGTTCGA ACGCCTGGCG GATGACGGCG TGCATGTGCT GACACCCGAA
GGCCCGCACC TGCTGCCGGC CGGTCATGTC ATCGACTGTC GCGGCATCCG GCGCGATCCC
GAAACCGACA GCTCGCCGGT GGTGCTGGAC CTGATCGCGA CGGGGCAGGG GCGGCTGGAC
CCGCTGCGGC TTGGCCTCGA CACGACCAGG GAGGCCCGGC TGATCGCGCG CGACGGCAGG
GTGTCGTCCC GGCTGTTCGC CATCGGTCCC TGCGCCCGTG CTGCGCTTTG GGAGATCACG
GCGATCCCCG ATATTCGCGT GCAATGCGCC CGTCTGGCCG AATTGCTGGA CCGCTTGCCG
GAGCCGGTAG GCTGA
|
|---|
| Protein sequence | MDGQFPQDGH RHIIIVGGGA SGVLAAAHLL RNDPFLRISM IEKSHSLGCG IAYSTDDPGH
LLNTRVHNMS AFPDDPEHFL RWLHSSGEAP EATPDCFAGR TAYGRYLENL LTAWGGDRLT
CHRQECLRIE EKPGCVRACL EDGSAIMGHL AILATGHAVP QHPPKGMRGG WDFAPPADSG
ADVVIIGTGL SMVDHVVTLL GRGHRGSITC LSRRGLLPRA HAASRAMAIA RDEIPLGAPV
SRVLHWLRAR IRQAEAEGLG WRDVLDGLRP HVSAIWQGWD EDSRRRFLRH AASWWEVHRH
RMPPQSAALI ADAQARGQLH VLRARFERLA DDGVHVLTPE GPHLLPAGHV IDCRGIRRDP
ETDSSPVVLD LIATGQGRLD PLRLGLDTTR EARLIARDGR VSSRLFAIGP CARAALWEIT
AIPDIRVQCA RLAELLDRLP EPVG
|
|---|
| |