| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5115 |
|---|
| Symbol | |
|---|
| ID | 4583676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 631818 |
|---|
| End bp | 633980 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639772418 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_918871 |
|---|
| Protein GI | 119387837 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.44963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.774948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC GCCTGCTTTC CGCCGCCTCG ATGCTTGCGC TTCTTGCCGG CCCCGCATTG
TCCGAAAGCT TCAACCGCAT CGCCTCGTTC CCAGTCACCG CCAACATGGC CGAGGGCGAG
GACAGGGACC GCACCTCGTC GGCCGAGATC ATCTCGGCTT CGCCGGACGG CATGACCCTG
ATCTATACCG ACAGCCCCCT GGGCGTGGTC GGGCTGATCG ACATCTCCGA CCCCCGGGCG
CCGAAGCCGC TGGGCAATGT CGCGCTGAAC GGCGAACCGA CCACCGCCCA TATCATCGGG
TCGCGCGCCT TCGTCGGGGT GAACACCTCG GAAAGCCACG CCAACCCCTC GGGCCGGCTT
GCCGTGATCG ATCTGGACAG CGCGGCCGAG GTGGCATCCT GCGACCTTGG CGGCCAGCCG
GATTCGGTGG CGGTGGCGCA TGACGGCAGC TTCCTGGCCG TGGCGATCGA GAACGAGCGC
GACGAGGAAG CGGGCGACGG CGGGCTGCCG CAGATGCCGG CGGGATTCCT GGTCAAGCTG
CCCGTTCGGG ACGGCACGGC CGATTGCGCG GCGCTTGAGC GGATCGAACT GACCGGCCTG
GCCGAGATCG CACCCGAGGA TCCCGAACCC GAATTCGTGG ACATCAACGA GGCGGGCGAG
ATCGTCGTCA CGCTTCAGGA AAACAACCAC ATCGCCGTCA TCGGCGCCGA TGGCAAACTC
GCCACGCATT TTTCGGCCGG CGCGGTCGTG CTGGAGAATG TCGATACCAG GACCGACGGC
AGGCTGGACT TTTCCGGCAA GACCGACCCG ATCCCGCGCG AACCCGACGG GGTGAAATGG
ATCGACACCG ATCATTTCGT CACCGCCAAC GAAGGCGACT GGAAGGGCGG CTCGCGCGGC
TTCACCATCT GGAACAAGGA CGGCACGGTC GTTTACGAAT CCGGCGCCAC GCTGGAACAT
GCCATCGCCG AGATCGGCCA CTATCCCGAG AAACGCTCGA AATCCAAGGG CGTCGAGATC
GAAAGCGTCG AATTCGCCCG CTTCGGCGAG ACGCCCTATC TGTTCGTGCT GTCCGAGCGC
GCCTCGGTCG TGGCGGTCTA TGACCTGACC GACCCGGCAG CGCCGAAACC GACCCAGATC
CTGCCCTCGG GCATCTCGCC CGAAGGGGCG GTCGCCATTC CCGCGCGCAA CCTGTTCGTC
ACCGCAAACG AGGCCGATCT GGGCGAGGAC GGCGCAGCAC GGGCGCATGT GATGATCTTC
GAGCGCTCGG ATGCCGAGCC GGCCTATCCG ATGCTGACCT CGGCCGGGGC GGACGCGCCG
ATCGGCTGGG GCGCGCTTGG CGCGCTGGCC TCGGCCCCCG GGCGCGACGA CCGGCTTTTC
GCCGCCTCGG ACAGCGTCTA TTCGGCCATG CCCTCGATCT ACGAGATCGA CATCAGCGCC
AAGCCGGCCC GGATCGTAAA GCAGACCATC GTCACCCGCG GCGGCAATGC GGCACAAAAG
CTCGACATCG AGGGGCTGGC CTCGGACGGC GAGGGCGGCT TCTGGCTGGC GAACGAGGGC
GATGCGGCCA AGCTGGTGCC CCATGCCATC CTGCATGTGA ACGAGGCGGG CGAGATCACG
CAGGAAATCG CGATGCCCGC CGAATTGCTG GCGCATCAGA CCCGCTTCGG CGCCGAAGGC
ATCGCCAAGG TCGGCAACAC GCTTTGGGTC GCGATGCAGC GGGAATGGGG CGACGATCCG
CAGGGGCAGG TCAAGCTGCT GGCCTATGAC CTCGACGCCG GGGAATGGGG CGCGGTGCGC
TATCCGCTGG AGCCGAAGGG CGAGGGCTGG ATGGGCCTGT CGGAGATCGC GGTGAAGGGC
GAACACGCCT ATGTCATCGA ACGCGACAAC CTGATCGGCG ACAGGGCGGC GGTGAAAAAG
ATCTTTCGCG TGGCGCTGGC CGACCTGCAA CCGGCGGCCT TGGGGGGCGA GTTGCCGGTC
GTCGCCAAGC AAGAGGTGCG CGACCTGATC CCCGAACTGC GCGGGCTGAC CAACGGCTAT
GTGGTGGACA AGGTCGAGGG GCTGGCCTTC GACGCCCGGG GCGACGCCTG GGTGGTGACC
GACAATGACG GCGTGGACGA CAGCTCGGGC GAGACGCTGT TCTGGAACCT TGGCGCGCTG
TGA
|
|---|
| Protein sequence | MTARLLSAAS MLALLAGPAL SESFNRIASF PVTANMAEGE DRDRTSSAEI ISASPDGMTL
IYTDSPLGVV GLIDISDPRA PKPLGNVALN GEPTTAHIIG SRAFVGVNTS ESHANPSGRL
AVIDLDSAAE VASCDLGGQP DSVAVAHDGS FLAVAIENER DEEAGDGGLP QMPAGFLVKL
PVRDGTADCA ALERIELTGL AEIAPEDPEP EFVDINEAGE IVVTLQENNH IAVIGADGKL
ATHFSAGAVV LENVDTRTDG RLDFSGKTDP IPREPDGVKW IDTDHFVTAN EGDWKGGSRG
FTIWNKDGTV VYESGATLEH AIAEIGHYPE KRSKSKGVEI ESVEFARFGE TPYLFVLSER
ASVVAVYDLT DPAAPKPTQI LPSGISPEGA VAIPARNLFV TANEADLGED GAARAHVMIF
ERSDAEPAYP MLTSAGADAP IGWGALGALA SAPGRDDRLF AASDSVYSAM PSIYEIDISA
KPARIVKQTI VTRGGNAAQK LDIEGLASDG EGGFWLANEG DAAKLVPHAI LHVNEAGEIT
QEIAMPAELL AHQTRFGAEG IAKVGNTLWV AMQREWGDDP QGQVKLLAYD LDAGEWGAVR
YPLEPKGEGW MGLSEIAVKG EHAYVIERDN LIGDRAAVKK IFRVALADLQ PAALGGELPV
VAKQEVRDLI PELRGLTNGY VVDKVEGLAF DARGDAWVVT DNDGVDDSSG ETLFWNLGAL
|
|---|
| |